Evidence map›Paper›PMID 25590633›Full record

ArticlePLoS genetics2015

Inactivation of PNKP by mutant ATXN3 triggers apoptosis by activating the DNA damage-response pathway in SCA3.

Rui Gao, Yongping Liu, Anabela Silva-Fernandes, Xiang Fang, Adriana Paulucci-Holthauzen, Arpita Chatterjee, Hang L Zhang, Tohru Matsuura, Sanjeev Choudhary, Tetsuo Ashizawa and 4 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed, 1 pooled it
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 1 synthesis or guideline pooled it, 84 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Ubiquitin System-Driven Proteostasis in DNA Damage Response.International journal of molecular sciences · 2026
    Review
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  5. Article
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  10. Review
  11. Fructose-2,6-bisphosphate restores DNA repair activity of PNKP and ameliorates neurodegenerative symptoms in Huntington's disease.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Correlated gene modules uncovered by high-precision single-cell transcriptomics.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 3 countries.

Rui GaoDepartment of Neurology, University of Texas Medical Branch, Galveston, Texas, United States of America.
Yongping LiuDepartment of Neurology, University of Texas Medical Branch, Galveston, Texas, United States of America.
Anabela Silva-FernandesLife and Health Sciences Research Institute (ICVS), School of Health Sciences, University of Minho, Braga, Portugal; ICVS/3B's PT Government Associate Laboratory, Braga/Guimarặes, Portugal.
Xiang FangDepartment of Neurology, University of Texas Medical Branch, Galveston, Texas, United States of America.
Adriana Paulucci-HolthauzenDepartment of Biomedical Engineering, University of Texas Medical Branch, Galveston, Texas, United States of America.
Arpita ChatterjeeDepartment of Internal Medicine, University of Texas Medical Branch, Galveston, Texas, United States of America.
Hang L ZhangDepartment of Neurology, University of Texas Medical Branch, Galveston, Texas, United States of America.
Tohru MatsuuraDepartment of Neurology, Jichi Medical School, Shimotsuke, Japan.
Sanjeev ChoudharyDepartment of Internal Medicine, University of Texas Medical Branch, Galveston, Texas, United States of America.
Tetsuo AshizawaDepartment of Neurology and McNight Brain Research Institute, University of Florida, Gainesville, Florida, United States of America.
Arnulf H KoeppenDepartment of Neurology, Albany Stratton VA Medical Center, Albany, New York, United States of America.
Patricia MacielLife and Health Sciences Research Institute (ICVS), School of Health Sciences, University of Minho, Braga, Portugal; ICVS/3B's PT Government Associate Laboratory, Braga/Guimarặes, Portugal.
Tapas K HazraDepartment of Internal Medicine, University of Texas Medical Branch, Galveston, Texas, United States of America.
Partha S SarkarDepartment of Neurology, University of Texas Medical Branch, Galveston, Texas, United States of America; Neuroscience and Cell Biology, University of Texas Medical Branch, Galveston, Texas, United States of America.
The University of Texas Medical Branch at Galveston · USUniversity of Minho · PTAlbany Stratton VA Medical Center Albany · USJichi Medical University · JPUniversity of Florida · US

Funding

Preferential single-strand break repair in the active genes of mammalian cellsR01NS073976 · NINDS · UNIVERSITY OF TEXAS MED BR GALVESTON · PI HAZRA, TAPAS K · 2012 to 2021
$3.3M
The Role of PGC-1aplha in the Pathogenesis of Myotonic Dystrophy Type 1K02NS081000 · NINDS · UNIVERSITY OF TEXAS MED BR GALVESTON · PI FANG, XIANG · 2013 to 2015
$557k
DNA double strand break repair deficiency and neurodegenerationR56NS073976 · NINDS · UNIVERSITY OF TEXAS MED BR GALVESTON · PI HAZRA, TAPAS K · 2024 to 2024
$536k
NINDS NIH HHS K02 NS081000NINDS NIH HHS NS073976NINDS NIH HHS R01 NS073976NINDS NIH HHS R56 NS073976
6 · The paper itself

Abstract

Spinocerebellar ataxia type 3 (SCA3), also known as Machado-Joseph disease (MJD), is an untreatable autosomal dominant neurodegenerative disease, and the most common such inherited ataxia worldwide. The mutation in SCA3 is the expansion of a polymorphic CAG tri-nucleotide repeat sequence in the C-terminal coding region of the ATXN3 gene at chromosomal locus 14q32.1. The mutant ATXN3 protein encoding expanded glutamine (polyQ) sequences interacts with multiple proteins in vivo, and is deposited as aggregates in the SCA3 brain. A large body of literature suggests that the loss of function of the native ATNX3-interacting proteins that are deposited in the polyQ aggregates contributes to cellular toxicity, systemic neurodegeneration and the pathogenic mechanism in SCA3. Nonetheless, a significant understanding of the disease etiology of SCA3, the molecular mechanism by which the polyQ expansions in the mutant ATXN3 induce neurodegeneration in SCA3 has remained elusive. In the present study, we show that the essential DNA strand break repair enzyme PNKP (polynucleotide kinase 3'-phosphatase) interacts with, and is inactivated by, the mutant ATXN3, resulting in inefficient DNA repair, persistent accumulation of DNA damage/strand breaks, and subsequent chronic activation of the DNA damage-response ataxia telangiectasia-mutated (ATM) signaling pathway in SCA3. We report that persistent accumulation of DNA damage/strand breaks and chronic activation of the serine/threonine kinase ATM and the downstream p53 and protein kinase C-δ pro-apoptotic pathways trigger neuronal dysfunction and eventually neuronal death in SCA3. Either PNKP overexpression or pharmacological inhibition of ATM dramatically blocked mutant ATXN3-mediated cell death. Discovery of the mechanism by which mutant ATXN3 induces DNA damage and amplifies the pro-death signaling pathways provides a molecular basis for neurodegeneration due to PNKP inactivation in SCA3, and for the first time offers a possible approach to treatment.

Indexed as

ApoptosisAtaxia Telangiectasia Mutated ProteinsAtaxin-3DNA DamageDNA RepairDNA Repair EnzymesHumansMachado-Joseph DiseaseNerve Tissue ProteinsNuclear ProteinsPhosphotransferases (Alcohol Group Acceptor)Protein AggregatesProtein Kinase C-deltaRepressor ProteinsSignal TransductionTrinucleotide Repeat ExpansionAtaxia Telangiectasia Mutated ProteinsAtaxin-3ATM protein, humanATXN3 protein, humanDNA Repair EnzymesNerve Tissue ProteinsNuclear ProteinsPhosphotransferases (Alcohol Group Acceptor)PNKP protein, humanProtein AggregatesProtein Kinase C-deltaRepressor Proteins

Identifiers

PMID25590633
PMCPMC4295939
OpenAlexW1991915850

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.