Evidence map›Paper›PMID 25588653›Full record

ArticleJournal of clinical microbiology2015

Development and validation of a quantitative PCR assay using multiplexed hydrolysis probes for detection and quantification of Theileria orientalis isolates and differentiation of clinically relevant subtypes.

D R Bogema, A T Deutscher, S Fell, D Collins, G J Eamens, C Jenkins

Open access · bronzeAbstract readValidation Study
In one paragraph

Article in Journal of clinical microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
7.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 62 citations in OpenAlex.

  1. From Benign Parasite to Emerging Pathogen: A Review ofAnimals : an open access journal from MDPI · 2026
    Review
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  8. Veterinary sciences · 2023
    Article
  9. Epidemiology and Transmission ofPathogens (Basel, Switzerland) · 2023
    Review
  10. Distribution and Prevalence ofPathogens (Basel, Switzerland) · 2023
    Article
  11. Distribution ofPathogens (Basel, Switzerland) · 2022
    Article
  12. Characterisation of thePathogens (Basel, Switzerland) · 2022
    Article
  13. Complete Genomes ofPathogens (Basel, Switzerland) · 2022
    Article
  14. Article
  15. Coinfection of cattle in Virginia withJournal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc · 2022
    Article
  16. Approaches to Integrated Parasite Management (IPM) forPathogens (Basel, Switzerland) · 2021
    Review
  17. Effects ofPathogens (Basel, Switzerland) · 2021
    Article
  18. Article
  19. Article
  20. Molecular detection ofJournal of parasitic diseases : official organ of the Indian Society for Parasitology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

D R Bogemaithree institute, University of Technology, Sydney, Ultimo, NSW, Australia Elizabeth Macarthur Agricultural Institute, NSW Department of Primary Industries, Menangle, NSW, Australia.
A T DeutscherElizabeth Macarthur Agricultural Institute, NSW Department of Primary Industries, Menangle, NSW, Australia.
S FellElizabeth Macarthur Agricultural Institute, NSW Department of Primary Industries, Menangle, NSW, Australia.
D CollinsElizabeth Macarthur Agricultural Institute, NSW Department of Primary Industries, Menangle, NSW, Australia.
G J EamensElizabeth Macarthur Agricultural Institute, NSW Department of Primary Industries, Menangle, NSW, Australia.
C Jenkinsithree institute, University of Technology, Sydney, Ultimo, NSW, Australia Elizabeth Macarthur Agricultural Institute, NSW Department of Primary Industries, Menangle, NSW, Australia cheryl.jenkins@dpi.nsw.gov.au.
New South Wales Department of Primary Industries · AUUniversity of Technology Sydney · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Theileria orientalis is an emerging pathogen of cattle in Asia, Australia, and New Zealand. This organism is a vector-borne hemoprotozoan that causes clinical disease characterized by anemia, abortion, and death, as well as persistent subclinical infections. Molecular methods of diagnosis are preferred due to their sensitivity and utility in differentiating between pathogenic and apathogenic genotypes. Conventional PCR (cPCR) assays for T. orientalis detection and typing are laborious and do not provide an estimate of parasite load. Current real-time PCR assays cannot differentiate between clinically relevant and benign genotypes or are only semiquantitative without a defined clinical threshold. Here, we developed and validated a hydrolysis probe quantitative PCR (qPCR) assay which universally detects and quantifies T. orientalis and identifies the clinically associated Ikeda and Chitose genotypes (UIC assay). Comparison of the UIC assay results with previously validated universal and genotype-specific cPCR results demonstrated that qPCR detects and differentiates T. orientalis with high sensitivity and specificiy. Comparison of quantitative results based on percent parasitemia, determined via blood film analysis and packed cell volume (PCV) revealed significant positive and negative correlations, respectively. One-way analysis of variance (ANOVA) indicated that blood samples from animals with clinical signs of disease contained statistically higher concentrations of T. orientalis DNA than animals with subclinical infections. We propose clinical thresholds to assist in classifying high-, moderate-, and low-level infections and describe how parasite load and the presence of the Ikeda and Chitose genotypes relate to disease.

Indexed as

Oligonucleotide ProbesAnimalsAsiaAustraliaBloodCattleCattle DiseasesMolecular Sequence DataNew ZealandParasite LoadReal-Time Polymerase Chain ReactionSensitivity and SpecificitySequence Analysis, DNATheileriaTheileriasisOligonucleotide Probes

Identifiers

PMID25588653
PMCPMC4390635
OpenAlexW2071108947

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.