Evidence map›Paper›PMID 25588652›Full record

ArticleJournal of clinical microbiology2015

Multicenter evaluation of the BioFire FilmArray gastrointestinal panel for etiologic diagnosis of infectious gastroenteritis.

Sarah N Buss, Amy Leber, Kimberle Chapin, Paul D Fey, Matthew J Bankowski, Matthew K Jones, Margarita Rogatcheva, Kristen J Kanack, Kevin M Bourzac

Registry-linked trialAbstract readEvaluation StudyMulticenter Study
In one paragraph

Article in Journal of clinical microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT04269174 (The Utility of Biofire Filmarray in Evaluation of Entero Pathogens Triggers in Patients With Chronic Diarrhea), which is not on this map. Cited by 259 papers, 6 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
259citing papers in PubMed, 6 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04269174 unknown statusnot on this mapstarted 2020, after this paper: background citation

The Utility of Biofire Filmarray in Evaluation of Entero Pathogens Triggers in Patients With Chronic Diarrhea

TypeobservationalSponsorShaimaa Mahmoud Abd El-mouezRan2020 to 2021Enrolled50ConditionsChronic Diarrhoea, Antibiotic Resistant Strain, Polymerase Chain Reaction
3 · Its place in the literature

Who cites it

259 citing papers in PubMed, 6 syntheses or guidelines pooled it.

  1. Pooled it
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  7. Trial
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  9. Evaluation of false positive enteric viruses results from the BIOFIRE® FILMARRAY® gastrointestinal PCR panel.Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology · 2026
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199 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Sarah N BussDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska, USA sarah.buss@wyo.gov.
Amy LeberDepartment of Laboratory Medicine, Nationwide Children's Hospital, Columbus, Ohio, USA.
Kimberle ChapinDepartments of Pathology and Medicine, Lifespan Academic Medical Center, Providence, Rhode Island, USA.
Paul D FeyDepartment of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, Nebraska, USA.
Matthew J BankowskiDiagnostic Laboratory Services, Inc., Aiea, Hawaii, USA Departments of Pathology, Tropical Medicine, Medical Microbiology, and Pharmacology, John A. Burns School of Medicine and the University of Hawaii at Manoa, Honolulu, Hawaii, USA.
Matthew K JonesBioFire Diagnostics, LLC, Salt Lake City, Utah, USA.
Margarita RogatchevaBioFire Diagnostics, LLC, Salt Lake City, Utah, USA.
Kristen J KanackBioFire Diagnostics, LLC, Salt Lake City, Utah, USA.
Kevin M BourzacBioFire Diagnostics, LLC, Salt Lake City, Utah, USA.

Funding

Performance Validation of a Multiplexed IVD System for Gastrointestinal PathogensR01AI104593 · NIAID · BIOFIRE DIAGNOSTICS, LLC · PI BOURZAC, KEVIN M · 2013 to 2015
$3.6M
An Automated Multi-target Diagnostic System for Gastrointestinal PathogensR01AI089489 · NIAID · BIOFIRE DEFENSE, LLC. · PI ROGATCHEVA, MARGARITA B · 2010 to 2012
$3.3M
NIAID NIH HHS R01 AI 089489NIAID NIH HHS R01 AI089489NIAID NIH HHS R01 AI 104593NIAID NIH HHS R01 AI104593
6 · The paper itself

Abstract

The appropriate treatment and control of infectious gastroenteritis depend on the ability to rapidly detect the wide range of etiologic agents associated with the disease. Clinical laboratories currently utilize an array of different methodologies to test for bacterial, parasitic, and viral causes of gastroenteritis, a strategy that suffers from poor sensitivity, potentially long turnaround times, and complicated ordering practices and workflows. Additionally, there are limited or no testing methods routinely available for most diarrheagenic Escherichia coli strains, astroviruses, and sapoviruses. This study assessed the performance of the FilmArray Gastrointestinal (GI) Panel for the simultaneous detection of 22 different enteric pathogens directly from stool specimens: Campylobacter spp., Clostridium difficile (toxin A/B), Plesiomonas shigelloides, Salmonella spp., Vibrio spp., Vibrio cholerae, Yersinia enterocolitica, enteroaggregative E. coli, enteropathogenic E. coli, enterotoxigenic E. coli, Shiga-like toxin-producing E. coli (stx1 and stx2) (including specific detection of E. coli O157), Shigella spp./enteroinvasive E. coli, Cryptosporidium spp., Cyclospora cayetanensis, Entamoeba histolytica, Giardia lamblia, adenovirus F 40/41, astrovirus, norovirus GI/GII, rotavirus A, and sapovirus. Prospectively collected stool specimens (n = 1,556) were evaluated using the BioFire FilmArray GI Panel and tested with conventional stool culture and molecular methods for comparison. The FilmArray GI Panel sensitivity was 100% for 12/22 targets and ≥94.5% for an additional 7/22 targets. For the remaining three targets, sensitivity could not be calculated due to the low prevalences in this study. The FilmArray GI Panel specificity was ≥97.1% for all panel targets. The FilmArray GI Panel provides a comprehensive, rapid, and streamlined alternative to conventional methods for the etiologic diagnosis of infectious gastroenteritis in the laboratory setting. The potential advantages include improved performance parameters, a more extensive menu of pathogens, and a turnaround time of as short as 1 h.

Indexed as

AdolescentAdultAgedAged, 80 and overAnimalsBacteriaChildChild, PreschoolFecesFemaleGastroenteritisHumansInfantInfant, NewbornMaleMicrobiological Techniques

Identifiers

PMID25588652
PMCPMC4390666

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.