Evidence map›Paper›PMID 25586181›Full record

ArticleThe Journal of biological chemistry2015

UBC9-dependent association between calnexin and protein tyrosine phosphatase 1B (PTP1B) at the endoplasmic reticulum.

Dukgyu Lee, Allison Kraus, Daniel Prins, Jody Groenendyk, Isabelle Aubry, Wen-Xin Liu, Hao-Dong Li, Olivier Julien, Nicolas Touret, Brian D Sykes and 2 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
  5. A View of the Endoplasmic Reticulum Through the Calreticulin Lens.Progress in molecular and subcellular biology · 2021
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Dukgyu LeeFrom the Department of Biochemistry, University of Alberta, Edmonton, Alberta T6G 2H7, Canada and.
Allison KrausFrom the Department of Biochemistry, University of Alberta, Edmonton, Alberta T6G 2H7, Canada and.
Daniel PrinsFrom the Department of Biochemistry, University of Alberta, Edmonton, Alberta T6G 2H7, Canada and.
Jody GroenendykFrom the Department of Biochemistry, University of Alberta, Edmonton, Alberta T6G 2H7, Canada and.
Isabelle AubryMcGill Cancer Centre, Department of Biochemistry, McGill University, Montreal, Quebec H3G 1Y6, Canada.
Wen-Xin LiuFrom the Department of Biochemistry, University of Alberta, Edmonton, Alberta T6G 2H7, Canada and.
Hao-Dong LiFrom the Department of Biochemistry, University of Alberta, Edmonton, Alberta T6G 2H7, Canada and.
Olivier JulienFrom the Department of Biochemistry, University of Alberta, Edmonton, Alberta T6G 2H7, Canada and.
Nicolas TouretFrom the Department of Biochemistry, University of Alberta, Edmonton, Alberta T6G 2H7, Canada and.
Brian D SykesFrom the Department of Biochemistry, University of Alberta, Edmonton, Alberta T6G 2H7, Canada and.
Michel L TremblayMcGill Cancer Centre, Department of Biochemistry, McGill University, Montreal, Quebec H3G 1Y6, Canada.
Marek MichalakMcGill Cancer Centre, Department of Biochemistry, McGill University, Montreal, Quebec H3G 1Y6, Canada marek.michalak@ualberta.ca.
University of Alberta · CAMcGill University · CA

Funding

Canadian Institutes of Health Research MOP15291Canadian Institutes of Health Research MOP37769Canadian Institutes of Health Research MOP62887Canadian Institutes of Health Research MOP93659
6 · The paper itself

Abstract

Calnexin is a type I integral endoplasmic reticulum (ER) membrane protein, molecular chaperone, and a component of the translocon. We discovered a novel interaction between the calnexin cytoplasmic domain and UBC9, a SUMOylation E2 ligase, which modified the calnexin cytoplasmic domain by the addition of SUMO. We demonstrated that calnexin interaction with the SUMOylation machinery modulates an interaction with protein tyrosine phosphatase 1B (PTP1B), an ER-associated protein tyrosine phosphatase involved in the negative regulation of insulin and leptin signaling. We showed that calnexin and PTP1B form UBC9-dependent complexes, revealing a previously unrecognized contribution of calnexin to the retention of PTP1B at the ER membrane. This work shows that the SUMOylation machinery links two ER proteins from divergent pathways to potentially affect cellular protein quality control and energy metabolism.

Indexed as

AnimalsBlotting, WesternCalnexinDogsEndoplasmic ReticulumHeLa CellsHumansMiceMice, KnockoutMicroscopy, ConfocalNIH 3T3 CellsProtein BindingProtein Tyrosine Phosphatase, Non-Receptor Type 1RNA InterferenceSumoylationTwo-Hybrid System TechniquesCalnexinProtein Tyrosine Phosphatase, Non-Receptor Type 1PTPN1 protein, humanUbiquitin-Conjugating EnzymesUbiquitin-Conjugating Enzyme UBC9chaperoneendoplasmic reticulum (ER)protein foldingsmall ubiquitin-like modifier (SUMO)tyrosine-protein phosphatase (tyrosine phosphatase)

Identifiers

PMID25586181
PMCPMC4342483
OpenAlexW2054992103

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.