Evidence map›Paper›PMID 25585018›Full record

ArticleNeuroImage2015

Effects of rejecting diffusion directions on tensor-derived parameters.

Yiran Chen, Olga Tymofiyeva, Christopher P Hess, Duan Xu

Abstract read
In one paragraph

Article in NeuroImage, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
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  9. Article
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  11. Article
  12. Altered frontostriatal white matter microstructure is associated with familial alcoholism and future binge drinking in adolescence.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2019
    Article
  13. Reduced White Matter Fiber Density in Autism Spectrum Disorder.Cerebral cortex (New York, N.Y. : 1991) · 2019
    Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Microstructure of the Default Mode Network in Preterm Infants.AJNR. American journal of neuroradiology · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Yiran ChenDepartment of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, CA, USA.
Olga TymofiyevaDepartment of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, CA, USA.
Christopher P HessDepartment of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, CA, USA.
Duan XuDepartment of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, CA, USA. Electronic address: Duan.Xu@ucsf.edu.

Funding

Repair in High Risk Newborns with Congential Heart DiseaseP01NS082330 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI XU, DUAN · 2014 to 2018
$6.0M
Development of Advanced Techniques for MR of the Newborn BrainR01EB009756 · NIBIB · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BARKOVICH, ANTHONY JAMES, XU, DUAN · 2009 to 2013
$5.5M
Towards Baby Brain Connectome: a Study of Newborn Brain NetworksR01HD072074 · NICHD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HESS, CHRISTOPHER PAUL, XU, DUAN · 2013 to 2017
$3.0M
NIBIB NIH HHS NIH R01EB009756NIBIB NIH HHS R01 EB009756NICHD NIH HHS R01 HD072074NICHD NIH HHS R01HD072074NINDS NIH HHS P01 NS082330NINDS NIH HHS P01NS082330
6 · The paper itself

Abstract

Diffusion Tensor Imaging (DTI) is adversely affected by subject motion. It is necessary to discard the corrupted images before diffusion parameter estimation. However, the consequences of rejecting those images are not well understood. In this study, we investigated the effects of excluding one or more volumes of diffusion weighted images by analyzing the changes in fractional anisotropy (FA), mean diffusivity (MD), axial diffusivity (AD), radial diffusivity (RD) and the primary eigenvector (V1). Based on the full set of diffusion images acquired by the Jones30 diffusion scheme, we generated incomplete sets of at least six in three different ways: random, uniform and clustered rejections. The results showed that MD was not significantly affected by rejecting diffusion directions. In the cases of random rejections, FA, AD, RD and V1 were overestimated more greatly with increasing number of rejections and the overestimations were worse in low FA regions than high FA regions. For uniform rejections, at which the remaining diffusion directions are evenly distributed on a sphere, little change was observed in FA and in V1. Clustered rejections, on the other hand, displayed the most significant overestimation of the parameters, and the resulting accuracy depended on the relative orientation of the underlying fibers with respect to the excluded directions. In practice, if diffusion direction data is excluded, it is important to note the number and location of directions rejected, in order to make a more precise analysis of the data.

Indexed as

ArtifactsAdultAnisotropyBrainBrain MappingDiffusion Tensor ImagingFemaleHumansImage Processing, Computer-AssistedYoung AdultAnisotropyBrainDTIMotionMRI

Identifiers

PMID25585018
PMCPMC4339467

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.