Evidence map›Paper›PMID 25584637›Full record

ArticleBiochemistry2015

Oxidation of p53 through DNA charge transport involves a network of disulfides within the DNA-binding domain.

Kathryn N Schaefer, Wendy M Geil, Michael J Sweredoski, Annie Moradian, Sonja Hess, Jacqueline K Barton

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 12 citations in OpenAlex.

  1. Nitration in cancer signaling.Redox biology · 2026
    Review
  2. S-Nitrosylation of p53 in Melanoma Cells Under Nitrosative Stress.International journal of molecular sciences · 2025
    Article
  3. Article
  4. Article
  5. Remote Photodamaging of DNA by Photoinduced Energy Transport.Chembiochem : a European journal of chemical biology · 2022
    Review
  6. UvrC Coordinates an OJournal of the American Chemical Society · 2020
    Article
  7. Article
  8. Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Kathryn N SchaeferDivision of Chemistry and Chemical Engineering, California Institute of Technology , Pasadena, California 91125, United States.
Wendy M Geil
Michael J Sweredoski
Annie Moradian
Sonja Hess
Jacqueline K Barton
California Institute of Technology · US

Funding

Purchase of a nanoLC-QTRAP Mass Spectrometer for Targeted Proteomics StudiesS10OD010788 · OD · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI HESS, SONJA · 2013 to 2013
$600k
NIH HHS 1S10OD010788-01A1
6 · The paper itself

Abstract

Transcription factor p53 plays a critical role in the cellular response to stress stimuli. We have seen that p53 dissociates selectively from various promoter sites as a result of oxidation at long-range through DNA-mediated charge transport (CT). Here, we examine this chemical oxidation and determine the residues in p53 that are essential for oxidative dissociation, focusing on the network of cysteine residues adjacent to the DNA-binding site. Of the eight mutants studied, only the C275S mutation shows decreased affinity for the Gadd45 promoter site. However, both mutations C275S and C277S result in substantial attenuation of oxidative dissociation, with C275S causing the most severe attenuation. Differential thiol labeling was used to determine the oxidation states of cysteine residues within p53 after DNA-mediated oxidation. Reduced cysteines were iodoacetamide-labeled, whereas oxidized cysteines participating in disulfide bonds were (13)C2D2-iodoacetamide-labeled. Intensities of respective iodoacetamide-modified peptide fragments were analyzed by mass spectrometry. A distinct shift in peptide labeling toward (13)C2D2-iodoacetamide-labeled cysteines is observed in oxidized samples, confirming that chemical oxidation of p53 occurs at long range. All observable cysteine residues trend toward the heavy label under conditions of DNA CT, indicating the formation of multiple disulfide bonds among the cysteine network. On the basis of these data, it is proposed that disulfide formation involving C275 is critical for inducing oxidative dissociation of p53 from DNA.

Indexed as

ElectronsCysteineDisulfidesDNAElectrophoretic Mobility Shift AssayGADD45 ProteinsHumansIntracellular Signaling Peptides and ProteinsKineticsMass SpectrometryMutant ProteinsOxidation-ReductionPromoter Regions, GeneticProtein Structure, TertiaryStructure-Activity RelationshipSulfhydryl CompoundsCysteineDisulfidesDNAGADD45 ProteinsIntracellular Signaling Peptides and ProteinsMutant ProteinsSulfhydryl CompoundsTumor Suppressor Protein p53

Identifiers

PMID25584637
PMCPMC4310631
OpenAlexW1978397591

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.