Evidence map›Paper›PMID 25583925›Full record

ArticlePlant physiology2015

COBRA-LIKE2, a member of the glycosylphosphatidylinositol-anchored COBRA-LIKE family, plays a role in cellulose deposition in arabidopsis seed coat mucilage secretory cells.

Daniela Ben-Tov, Yael Abraham, Shira Stav, Kevin Thompson, Ann Loraine, Rivka Elbaum, Amancio de Souza, Markus Pauly, Joseph J Kieber, Smadar Harpaz-Saad

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
18.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 96 citations in OpenAlex.

  1. Review
  2. Wheat COBRA-like GeneInternational journal of molecular sciences · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Daniela Ben-TovRobert H. Smith Institute of Plant Sciences and Genetics in Agriculture, Hebrew University, Rehovot 76100, Israel (D.B.-T., Y.A., R.E., S.H.-S.);Department of Bioinformatics and Genomics, University of North Carolina, Kannapolis, North Carolina 28081 (S.S., K.T., A.L.);Energy Biosciences Institute (A.d.S., M.P.) and Department of Plant and Microbial Biology (M.P.), University of California, Berkeley, California 94720; andBiology Department, University of North Carolina, Chapel Hill, North Carolina 27599 (J.J.K.).
Yael AbrahamRobert H. Smith Institute of Plant Sciences and Genetics in Agriculture, Hebrew University, Rehovot 76100, Israel (D.B.-T., Y.A., R.E., S.H.-S.);Department of Bioinformatics and Genomics, University of North Carolina, Kannapolis, North Carolina 28081 (S.S., K.T., A.L.);Energy Biosciences Institute (A.d.S., M.P.) and Department of Plant and Microbial Biology (M.P.), University of California, Berkeley, California 94720; andBiology Department, University of North Carolina, Chapel Hill, North Carolina 27599 (J.J.K.).
Shira StavRobert H. Smith Institute of Plant Sciences and Genetics in Agriculture, Hebrew University, Rehovot 76100, Israel (D.B.-T., Y.A., R.E., S.H.-S.);Department of Bioinformatics and Genomics, University of North Carolina, Kannapolis, North Carolina 28081 (S.S., K.T., A.L.);Energy Biosciences Institute (A.d.S., M.P.) and Department of Plant and Microbial Biology (M.P.), University of California, Berkeley, California 94720; andBiology Department, University of North Carolina, Chapel Hill, North Carolina 27599 (J.J.K.).
Kevin ThompsonRobert H. Smith Institute of Plant Sciences and Genetics in Agriculture, Hebrew University, Rehovot 76100, Israel (D.B.-T., Y.A., R.E., S.H.-S.);Department of Bioinformatics and Genomics, University of North Carolina, Kannapolis, North Carolina 28081 (S.S., K.T., A.L.);Energy Biosciences Institute (A.d.S., M.P.) and Department of Plant and Microbial Biology (M.P.), University of California, Berkeley, California 94720; andBiology Department, University of North Carolina, Chapel Hill, North Carolina 27599 (J.J.K.).
Ann LoraineRobert H. Smith Institute of Plant Sciences and Genetics in Agriculture, Hebrew University, Rehovot 76100, Israel (D.B.-T., Y.A., R.E., S.H.-S.);Department of Bioinformatics and Genomics, University of North Carolina, Kannapolis, North Carolina 28081 (S.S., K.T., A.L.);Energy Biosciences Institute (A.d.S., M.P.) and Department of Plant and Microbial Biology (M.P.), University of California, Berkeley, California 94720; andBiology Department, University of North Carolina, Chapel Hill, North Carolina 27599 (J.J.K.).
Rivka ElbaumRobert H. Smith Institute of Plant Sciences and Genetics in Agriculture, Hebrew University, Rehovot 76100, Israel (D.B.-T., Y.A., R.E., S.H.-S.);Department of Bioinformatics and Genomics, University of North Carolina, Kannapolis, North Carolina 28081 (S.S., K.T., A.L.);Energy Biosciences Institute (A.d.S., M.P.) and Department of Plant and Microbial Biology (M.P.), University of California, Berkeley, California 94720; andBiology Department, University of North Carolina, Chapel Hill, North Carolina 27599 (J.J.K.).
Amancio de SouzaRobert H. Smith Institute of Plant Sciences and Genetics in Agriculture, Hebrew University, Rehovot 76100, Israel (D.B.-T., Y.A., R.E., S.H.-S.);Department of Bioinformatics and Genomics, University of North Carolina, Kannapolis, North Carolina 28081 (S.S., K.T., A.L.);Energy Biosciences Institute (A.d.S., M.P.) and Department of Plant and Microbial Biology (M.P.), University of California, Berkeley, California 94720; andBiology Department, University of North Carolina, Chapel Hill, North Carolina 27599 (J.J.K.).
Markus PaulyRobert H. Smith Institute of Plant Sciences and Genetics in Agriculture, Hebrew University, Rehovot 76100, Israel (D.B.-T., Y.A., R.E., S.H.-S.);Department of Bioinformatics and Genomics, University of North Carolina, Kannapolis, North Carolina 28081 (S.S., K.T., A.L.);Energy Biosciences Institute (A.d.S., M.P.) and Department of Plant and Microbial Biology (M.P.), University of California, Berkeley, California 94720; andBiology Department, University of North Carolina, Chapel Hill, North Carolina 27599 (J.J.K.).
Joseph J KieberRobert H. Smith Institute of Plant Sciences and Genetics in Agriculture, Hebrew University, Rehovot 76100, Israel (D.B.-T., Y.A., R.E., S.H.-S.);Department of Bioinformatics and Genomics, University of North Carolina, Kannapolis, North Carolina 28081 (S.S., K.T., A.L.);Energy Biosciences Institute (A.d.S., M.P.) and Department of Plant and Microbial Biology (M.P.), University of California, Berkeley, California 94720; andBiology Department, University of North Carolina, Chapel Hill, North Carolina 27599 (J.J.K.).
Smadar Harpaz-SaadRobert H. Smith Institute of Plant Sciences and Genetics in Agriculture, Hebrew University, Rehovot 76100, Israel (D.B.-T., Y.A., R.E., S.H.-S.);Department of Bioinformatics and Genomics, University of North Carolina, Kannapolis, North Carolina 28081 (S.S., K.T., A.L.);Energy Biosciences Institute (A.d.S., M.P.) and Department of Plant and Microbial Biology (M.P.), University of California, Berkeley, California 94720; andBiology Department, University of North Carolina, Chapel Hill, North Carolina 27599 (J.J.K.) smadar.harpaz@mail.huji.ac.il.
Hebrew University of Jerusalem · ILDavid H. Murdock Research Institute · USUniversity of California, Berkeley · USUniversity of North Carolina at Chapel Hill · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Differentiation of the maternally derived seed coat epidermal cells into mucilage secretory cells is a common adaptation in angiosperms. Recent studies identified cellulose as an important component of seed mucilage in various species. Cellulose is deposited as a set of rays that radiate from the seed upon mucilage extrusion, serving to anchor the pectic component of seed mucilage to the seed surface. Using transcriptome data encompassing the course of seed development, we identified COBRA-LIKE2 (COBL2), a member of the glycosylphosphatidylinositol-anchored COBRA-LIKE gene family in Arabidopsis (Arabidopsis thaliana), as coexpressed with other genes involved in cellulose deposition in mucilage secretory cells. Disruption of the COBL2 gene results in substantial reduction in the rays of cellulose present in seed mucilage, along with an increased solubility of the pectic component of the mucilage. Light birefringence demonstrates a substantial decrease in crystalline cellulose deposition into the cellulosic rays of the cobl2 mutants. Moreover, crystalline cellulose deposition into the radial cell walls and the columella appears substantially compromised, as demonstrated by scanning electron microscopy and in situ quantification of light birefringence. Overall, the cobl2 mutants display about 40% reduction in whole-seed crystalline cellulose content compared with the wild type. These data establish that COBL2 plays a role in the deposition of crystalline cellulose into various secondary cell wall structures during seed coat epidermal cell differentiation.

Indexed as

ArabidopsisArabidopsis ProteinsBirefringenceCationsCell DifferentiationCelluloseCell WallChelating AgentsCrystallizationGene Expression Regulation, PlantGlycosylphosphatidylinositolsMembrane ProteinsMutationOrgan SpecificityPectinsPlant EpidermisArabidopsis ProteinsCationsCelluloseChelating AgentsCOBL2 protein, ArabidopsisGlycosylphosphatidylinositolsMembrane ProteinsPectinsPlant Mucilage

Identifiers

PMID25583925
PMCPMC4347734
OpenAlexW2072974509

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.