Evidence map›Paper›PMID 25583649›Full record

ArticleG3 (Bethesda, Md.)2015

A genome-wide association study for nutritional indices in Drosophila.

Robert L Unckless, Susan M Rottschaefer, Brian P Lazzaro

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Obesity and Aging in theInternational journal of molecular sciences · 2018
    Review
  12. Article
  13. A Genomic Reference Panel forG3 (Bethesda, Md.) · 2018
    Article
  14. The road less traveled: from genotype to phenotype in flies and humans.Mammalian genome : official journal of the International Mammalian Genome Society · 2018
    Article
  15. Article
  16. Population genetic diversity in zebrafish lines.Mammalian genome : official journal of the International Mammalian Genome Society · 2018
    Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Robert L UncklessDepartment of Entomology, Cornell University, Ithaca, New York 14853 rlu1@cornell.edu.ORCID http://orcid.org/0000-0001-8586-7137
Susan M RottschaeferDepartment of Entomology, Cornell University, Ithaca, New York 14853.
Brian P LazzaroDepartment of Entomology, Cornell University, Ithaca, New York 14853.

Funding

Functional /Comparative Genomic of Drosophila immunityR01AI064950 · NIAID · CORNELL UNIVERSITY ITHACA · PI CLARK, ANDREW G, LAZZARO, BRIAN · 2005 to 2016
$3.7M
Genetic Network Linking Immunity to Energetic Stress, Metabolism and ReproductionR01AI083932 · NIAID · CORNELL UNIVERSITY · PI LAZZARO, BRIAN · 2009 to 2015
$2.6M
The Genetics and Genomics of Sex-Ratio Meiotic Drive in Drosophila AffinisF32HD071703 · NICHD · CORNELL UNIVERSITY · PI UNCKLESS, ROBERT L · 2012 to 2014
$156k
NIAID NIH HHS R01 AI064950NIAID NIH HHS R01 AI083932NICHD NIH HHS F32 HD071703NICHD NIH HHS F32-HD071703
6 · The paper itself

Abstract

Individuals are genetically variable for the way in which they process nutrients and in the effects of dietary content on reproductive success, immunity, and development. Here, we surveyed genetic variation for nutrient stores (glucose, glycogen, glycerol, protein, triglycerides, and wet weight) in the Drosophila Genetic Reference Panel (DGRP) after rearing the flies on either a low-glucose or high-glucose diet. We found significant genetic variation for these nutritional phenotypes and identified candidate genes that underlie that variation using genome-wide associations. In addition, we found several significant correlations between the nutritional phenotypes measured in this study and other previously published phenotypes, such as starvation stress resistance, oxidative stress sensitivity, and endoplasmic reticulum stress, which reinforce the notion that these lines can be used to robustly measure related phenotypes across distinct laboratories.

Indexed as

Genome, InsectAnimalsCarbohydrate MetabolismDrosophilaEndoplasmic Reticulum StressGenome-Wide Association StudyNutritional Physiological PhenomenaOxidative StressPhenotypePolymorphism, GeneticDGRPDrosophilaglucoseglycogenproteintriglycerideweight

Identifiers

PMID25583649
PMCPMC4349095

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.