Evidence map›Paper›PMID 25583260›Full record

ArticleThe Biochemical journal2015

The Tribbles 2 (TRB2) pseudokinase binds to ATP and autophosphorylates in a metal-independent manner.

Fiona P Bailey, Dominic P Byrne, Krishnadev Oruganty, Claire E Eyers, Christopher J Novotny, Kevan M Shokat, Natarajan Kannan, Patrick A Eyers

Open access · greenAbstract readComparative Study
In one paragraph

Article in The Biochemical journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 80 citations in OpenAlex.

  1. Disruption ofAnimals : an open access journal from MDPI · 2026
    Article
  2. Article
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  4. The role of tribbles homolog 2 in cell proliferation.Cell communication and signaling : CCS · 2025
    Review
  5. Article
  6. Review
  7. Emerging functions of pseudoenzymes.The Biochemical journal · 2023
    Review
  8. miR-100-5p Regulates Skeletal Muscle Myogenesis through theInternational journal of molecular sciences · 2023
    Article
  9. PK1 fromOpen biology · 2023
    Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Review
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Fiona P Bailey*Department of Biochemistry, Institute of Integrative Biology, University of Liverpool, Liverpool L69 7ZB, U.K.
Dominic P Byrne*Department of Biochemistry, Institute of Integrative Biology, University of Liverpool, Liverpool L69 7ZB, U.K.
Krishnadev Oruganty†Institute of Bioinformatics, University of Georgia, Athens, GA 30602, U.S.A.
Claire E Eyers*Department of Biochemistry, Institute of Integrative Biology, University of Liverpool, Liverpool L69 7ZB, U.K.
Christopher J Novotny‡Department of Cellular and Molecular Pharmacology, Howard Hughes Medical Institute, UCSF, San Francisco, CA 94158, U.S.A.
Kevan M Shokat‡Department of Cellular and Molecular Pharmacology, Howard Hughes Medical Institute, UCSF, San Francisco, CA 94158, U.S.A.
Natarajan Kannan†Institute of Bioinformatics, University of Georgia, Athens, GA 30602, U.S.A.
Patrick A Eyers*Department of Biochemistry, Institute of Integrative Biology, University of Liverpool, Liverpool L69 7ZB, U.K.
University of Georgia · US

Funding

RESEARCH TRAINING IN CHEMISTRY AND CHEMICAL BIOLOGYT32GM064337 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CRAIK, CHARLES SCOTT · 2002 to 2021
$7.8M
NCI NIH HHS CA-0052023NIGMS NIH HHS T32 GM064337
6 · The paper itself

Abstract

The human Tribbles (TRB)-related pseudokinases are CAMK (calcium/calmodulin-dependent protein kinase)-related family members that have evolved a series of highly unusual motifs in the 'pseudocatalytic' domain. In canonical kinases, conserved amino acids bind to divalent metal ions and align ATP prior to efficient phosphoryl-transfer to substrates. However, in pseudokinases, atypical residues give rise to diverse and often unstudied biochemical and structural features that are thought to be central to cellular functions. TRB proteins play a crucial role in multiple signalling networks and overexpression confers cancer phenotypes on human cells, marking TRB pseudokinases out as a novel class of drug target. In the present paper, we report that the human pseudokinase TRB2 retains the ability to both bind and hydrolyse ATP weakly in vitro. Kinase activity is metal-independent and involves a catalytic lysine residue, which is conserved in TRB proteins throughout evolution alongside several unique amino acids in the active site. A similar low level of autophosphorylation is also preserved in the closely related human TRB3. By employing chemical genetics, we establish that the nucleotide-binding site of an 'analogue-sensitive' (AS) TRB2 mutant can be targeted with specific bulky ligands of the pyrazolo-pyrimidine (PP) chemotype. Our analysis confirms that TRB2 retains low levels of ATP binding and/or catalysis that is targetable with small molecules. Given the significant clinical successes associated with targeting of cancer-associated kinases with small molecule inhibitors, it is likely that similar approaches will be useful for further evaluating the TRB pseudokinases, with the translation of this information likely to furnish new leads for drug discovery.

Indexed as

Models, MolecularProtein Processing, Post-TranslationalAdenosine TriphosphateAmino Acid SequenceAmino Acid SubstitutionBiocatalysisCalcium-Calmodulin-Dependent Protein KinasesCatalytic DomainCell Cycle ProteinsConserved SequenceHumansHydrolysisIntracellular Signaling Peptides and ProteinsLysineMolecular Sequence DataMutant ProteinsAdenosine TriphosphateCalcium-Calmodulin-Dependent Protein KinasesCell Cycle ProteinsIntracellular Signaling Peptides and ProteinsLysineMutant ProteinsNeoplasm ProteinsProtein Serine-Threonine KinasesRecombinant ProteinsRepressor ProteinsTRIB2 protein, humanTRIB3 protein, human

Identifiers

PMID25583260
PMCPMC4844368
OpenAlexW2160761064

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.