Evidence map›Paper›PMID 25578459›Full record

ArticleThe Journal of membrane biology2015

Following Natures Lead: On the Construction of Membrane-Inserted Toxins in Lipid Bilayer Nanodiscs.

Narahari Akkaladevi, Srayanta Mukherjee, Hiroo Katayama, Blythe Janowiak, Deepa Patel, Edward P Gogol, Bradley L Pentelute, R John Collier, Mark T Fisher

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of membrane biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 2 countries.

Narahari AkkaladeviDepartment of Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, KS, USA.
Srayanta Mukherjee
Hiroo Katayama
Blythe Janowiak
Deepa Patel
Edward P Gogol
Bradley L Pentelute
R John Collier
Mark T Fisher
University of Kansas Medical Center · USHarvard University · USHarvard University Press · USMassachusetts Institute of Technology · USSaint Louis University · USUniversity of Missouri–Kansas City · US

Funding

Treatments for Nipah Virus InfectionU54AI057159 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI ONDERDONK, ANDREW B. · 2003 to 2013
$113.7M
3 D ELECTRON MICROSCOPY OF MACROMOLECULES (5P41RR002250-27)P41GM103832 · NIGMS · STANFORD UNIVERSITY · PI CHIU, WAH · 2012 to 2019
$15.1M
MOLECULAR MECHANISMS OF BACTERIAL PATHOGENESISR37AI022021 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI COLLIER, ROBERT JOHN · 1988 to 2007
$6.1M
CryoEM analysis of Anthrax Toxin Pore ComplexesR01AI090085 · NIAID · UNIVERSITY OF KANSAS MEDICAL CENTER · PI FISHER, MARK T · 2011 to 2013
$948k
CryoEM analysis of Anthrax Toxin Pore ComplexesR56AI090085 · NIAID · UNIVERSITY OF KANSAS MEDICAL CENTER · PI FISHER, MARK T · 2010 to 2010
$300k
NIAID NIH HHS AI057159NIAID NIH HHS R01 AI090085NIAID NIH HHS R01AI090085NIAID NIH HHS R37 AI022021NIAID NIH HHS R56 AI090085NIAID NIH HHS R56 R56AI090085NIAID NIH HHS SR37AI022021NIAID NIH HHS U54 AI057159NIGMS NIH HHS P41 GM103832
6 · The paper itself

Abstract

Bacterial toxin or viral entry into the cell often requires cell surface binding and endocytosis. The endosomal acidification induces a limited unfolding/refolding and membrane insertion reaction of the soluble toxins or viral proteins into their translocation competent or membrane inserted states. At the molecular level, the specific orientation and immobilization of the pre-transitioned toxin on the cell surface is often an important prerequisite prior to cell entry. We propose that structures of some toxin membrane insertion complexes may be observed through procedures where one rationally immobilizes the soluble toxin so that potential unfolding ↔ refolding transitions that occur prior to membrane insertion orientate away from the immobilization surface in the presence of lipid micelle pre-nanodisc structures. As a specific example, the immobilized prepore form of the anthrax toxin pore translocon or protective antigen can be transitioned, inserted into a model lipid membrane (nanodiscs), and released from the immobilized support in its membrane solubilized form. This particular strategy, although unconventional, is a useful procedure for generating pure membrane-inserted toxins in nanodiscs for electron microscopy structural analysis. In addition, generating a similar immobilized platform on label-free biosensor surfaces allows one to observe the kinetics of these acid-induced membrane insertion transitions. These platforms can facilitate the rational design of inhibitors that specifically target the toxin membrane insertion transitions that occur during endosomal acidification. This approach may lead to a new class of direct anti-toxin inhibitors.

Indexed as

Antigens, BacterialBacterial ToxinsBiosensing TechniquesCell MembraneChaperonin 60Cryoelectron MicroscopyEndosomesLipid BilayersModels, MolecularNanostructuresProtein Structure, Tertiaryanthrax toxinAntigens, BacterialBacterial ToxinsChaperonin 60Lipid Bilayers

Identifiers

PMID25578459
PMCPMC4580227
OpenAlexW1988094926

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.