Evidence map›Paper›PMID 25576608›Full record

ArticleApplied and environmental microbiology2015

Inhibitory effects of C2 to C10 1-alkynes on ammonia oxidation in two Nitrososphaera species.

A E Taylor, K Taylor, B Tennigkeit, M Palatinszky, M Stieglmeier, D D Myrold, C Schleper, M Wagner, P J Bottomley

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 58 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

A E TaylorDepartment of Crop and Soil Science, Oregon State University, Corvallis, Oregon, USA anne.taylor@oregonstate.edu.
K TaylorDepartment of Microbiology, Oregon State University, Corvallis, Oregon, USA.
B TennigkeitDepartment of Microbiology, Oregon State University, Corvallis, Oregon, USA.
M PalatinszkyDepartment of Microbial Ecology, University of Vienna, Vienna, Austria.
M StieglmeierDepartment of Ecogenomics and Systems Biology, Archaea Biology and Ecogenomics Division, University of Vienna, Vienna, Austria Department of Biology I, Biocenter LMU Munich, Planegg-Martinsried, Germany.
D D MyroldDepartment of Crop and Soil Science, Oregon State University, Corvallis, Oregon, USA.
C SchleperDepartment of Ecogenomics and Systems Biology, Archaea Biology and Ecogenomics Division, University of Vienna, Vienna, Austria.
M WagnerDepartment of Microbial Ecology, University of Vienna, Vienna, Austria.
P J BottomleyDepartment of Crop and Soil Science, Oregon State University, Corvallis, Oregon, USA Department of Microbiology, Oregon State University, Corvallis, Oregon, USA.
Oregon State University · USUniversity of Vienna · ATLudwig-Maximilians-Universität München · DE

Funding

European Research Council 294343
6 · The paper itself

Abstract

A previous study showed that ammonia oxidation by the Thaumarchaeota Nitrosopumilus maritimus (group 1.1a) was resistant to concentrations of the C8 1-alkyne, octyne, which completely inhibits activity by ammonia-oxidizing bacteria. In this study, the inhibitory effects of octyne and other C2 to C10 1-alkynes were evaluated on the nitrite production activity of two pure culture isolates from Thaumarchaeota group 1.1b, Nitrososphaera viennensis strain EN76 and Nitrososphaera gargensis. Both N. viennensis and N. gargensis were insensitive to concentrations of octyne that cause complete and irreversible inactivation of nitrite production by ammonia-oxidizing bacteria. However, octyne concentrations (≥20 μM) that did not inhibit N. maritimus partially inhibited nitrite production in N. viennensis and N. gargensis in a manner that did not show the characteristics of irreversible inactivation. In contrast to previous studies with an ammonia-oxidizing bacterium, Nitrosomonas europaea, octyne inhibition of N. viennensis was: (i) fully and immediately reversible, (ii) not competitive with NH4 (+), and (iii) without effect on the competitive interaction between NH4 (+) and acetylene. Both N. viennensis and N. gargensis demonstrated the same overall trend in regard to 1-alkyne inhibition as previously observed for N. maritimus, being highly sensitive to ≤C5 alkynes and more resistant to longer-chain length alkynes. Reproducible differences were observed among N. maritimus, N. viennensis, and N. gargensis in regard to the extent of their resistance/sensitivity to C6 and C7 1-alkynes, which may indicate differences in the ammonia monooxygenase binding and catalytic site(s) among the Thaumarchaeota.

Indexed as

AlkynesAmmoniaArchaeaNitritesOxidation-ReductionAlkynesAmmoniaNitrites

Identifiers

PMID25576608
PMCPMC4345366
OpenAlexW2076490271

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.