Evidence map›Paper›PMID 25575306›Full record

ArticleThe ISME journal2015

Aerobic and anaerobic nitrogen transformation processes in N2-fixing cyanobacterial aggregates.

Isabell Klawonn, Stefano Bonaglia, Volker Brüchert, Helle Ploug

Abstract read
In one paragraph

Article in The ISME journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed.

  1. Microbially enhanced dissolution of calcite in sinking marine particles.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  3. Assimilatory NFrontiers in microbiology · 2026
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  8. Particle-associated NScience advances · 2025
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  17. A mutant fitness assay identifies bacterial interactions in a model ocean hot spot.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  18. Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Isabell KlawonnStockholm University, Department of Ecology, Environment and Plant Sciences, Stockholm, Sweden.
Stefano BonagliaStockholm University, Department of Geological Sciences and Bolin Centre for Climate Research, Stockholm, Sweden.
Volker BrüchertStockholm University, Department of Geological Sciences and Bolin Centre for Climate Research, Stockholm, Sweden.
Helle Ploug1] Stockholm University, Department of Ecology, Environment and Plant Sciences, Stockholm, Sweden [2] University of Gothenburg, Department of Biology and Environmental Sciences, Gothenburg, Sweden.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Colonies of N(2)-fixing cyanobacteria are key players in supplying new nitrogen to the ocean, but the biological fate of this fixed nitrogen remains poorly constrained. Here, we report on aerobic and anaerobic microbial nitrogen transformation processes that co-occur within millimetre-sized cyanobacterial aggregates (Nodularia spumigena) collected in aerated surface waters in the Baltic Sea. Microelectrode profiles showed steep oxygen gradients inside the aggregates and the potential for nitrous oxide production in the aggregates' anoxic centres. (15)N-isotope labelling experiments and nutrient analyses revealed that N(2) fixation, ammonification, nitrification, nitrate reduction to ammonium, denitrification and possibly anaerobic ammonium oxidation (anammox) can co-occur within these consortia. Thus, N. spumigena aggregates are potential sites of nitrogen gain, recycling and loss. Rates of nitrate reduction to ammonium and N(2) were limited by low internal nitrification rates and low concentrations of nitrate in the ambient water. Presumably, patterns of N-transformation processes similar to those observed in this study arise also in other phytoplankton colonies, marine snow and fecal pellets. Anoxic microniches, as a pre-condition for anaerobic nitrogen transformations, may occur within large aggregates (⩾1 mm) even when suspended in fully oxygenated waters, whereas anoxia in small aggregates (<1 to ⩾0.1 mm) may only arise in low-oxygenated waters (⩽25 μM). We propose that the net effect of aggregates on nitrogen loss is negligible in NO(3)(-)-depleted, fully oxygenated (surface) waters. In NO(3)(-)-enriched (>1.5 μM), O(2)-depleted water layers, for example, in the chemocline of the Baltic Sea or the oceanic mesopelagic zone, aggregates may promote N-recycling and -loss processes.

Indexed as

Nitrogen CycleNitrogen FixationAmmonium CompoundsBaltic StatesCyanobacteriaDenitrificationNitratesNitrificationNitrogenNitrous OxideOceans and SeasOxygenPhytoplanktonSeawaterWater MicrobiologyAmmonium CompoundsNitratesNitrogenNitrous OxideOxygen

Identifiers

PMID25575306
PMCPMC4438332

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.