Evidence map›Paper›PMID 25574602›Full record

ArticleInternational journal of molecular sciences2015

The oxidative fermentation of ethanol in Gluconacetobacter diazotrophicus is a two-step pathway catalyzed by a single enzyme: alcohol-aldehyde Dehydrogenase (ADHa).

Saúl Gómez-Manzo, José E Escamilla, Abigail González-Valdez, Gabriel López-Velázquez, América Vanoye-Carlo, Jaime Marcial-Quino, Ignacio de la Mora-de la Mora, Itzhel Garcia-Torres, Sergio Enríquez-Flores, Martha Lucinda Contreras-Zentella and 3 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Bioinorganic insights of the PQQ-dependent alcohol dehydrogenases.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Saúl Gómez-ManzoLaboratorio de Bioquímica-Genética, Instituto Nacional de Pediatría, S.S. Mexico City 04530, Mexico. saulmanzo@ciencias.unam.mx.
José E EscamillaDepartamento de Bioquímica y Biología Estructural, Instituto de Fisiología Celular, Universidad Nacional Autónoma de México, Mexico City 04510, Mexico. mcontre@ifc.unam.mx.
Abigail González-ValdezDepartamento de Biología Molecular y Biotecnología, Instituto de Investigaciones Biomédicas, Universidad Nacional Autónoma de México, Mexico City 04510, Mexico. abigaila@correo.biomedicas.unam.mx.
Gabriel López-VelázquezLaboratorio de Bioquímica-Genética, Instituto Nacional de Pediatría, S.S. Mexico City 04530, Mexico. glv_1999@yahoo.com.
América Vanoye-CarloLaboratorio de Bioquímica-Genética, Instituto Nacional de Pediatría, S.S. Mexico City 04530, Mexico. america_vc@yahoo.com.mx.
Jaime Marcial-QuinoCONACyT, Comisionado a Instituto Nacional de Pediatría, S.S. Mexico City 03940, Mexico. jmarcialqu@conacyt.mx.
Ignacio de la Mora-de la MoraLaboratorio de Bioquímica-Genética, Instituto Nacional de Pediatría, S.S. Mexico City 04530, Mexico. ignaciodelamora@yahoo.com.mx.
Itzhel Garcia-TorresLaboratorio de Bioquímica-Genética, Instituto Nacional de Pediatría, S.S. Mexico City 04530, Mexico. itzheltorres@hotmail.com.
Sergio Enríquez-FloresLaboratorio de Bioquímica-Genética, Instituto Nacional de Pediatría, S.S. Mexico City 04530, Mexico. sergioenr@gmail.com.
Martha Lucinda Contreras-ZentellaDepartamento de Bioquímica y Biología Estructural, Instituto de Fisiología Celular, Universidad Nacional Autónoma de México, Mexico City 04510, Mexico. mcontre@ifc.unam.mx.
Roberto Arreguín-EspinosaDepartamento de Química de Biomacromoléculas, Instituto de Química, Universidad Nacional Autónoma de México, Circuito Exterior s/n, Ciudad Universitaria, Mexico City 04510, Mexico. arrespin@unam.mx.
Peter M H KroneckFachbereich Biologie, Universität Konstanz, 78457 Konstanz, Germany. Peter.Kroneck@Uni-Konstanz.de.
Martha Elena Sosa-TorresDepartamento de Química Inorgánica y Nuclear, Facultad de Química, Universidad Nacional Autónoma de México, Mexico City 04510, Mexico. mest@unam.mx.
Instituto Nacional de Pediatria · MXUniversidad Nacional Autónoma de México · MXUniversity of Konstanz · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gluconacetobacter diazotrophicus is a N2-fixing bacterium endophyte from sugar cane. The oxidation of ethanol to acetic acid of this organism takes place in the periplasmic space, and this reaction is catalyzed by two membrane-bound enzymes complexes: the alcohol dehydrogenase (ADH) and the aldehyde dehydrogenase (ALDH). We present strong evidence showing that the well-known membrane-bound Alcohol dehydrogenase (ADHa) of Ga. diazotrophicus is indeed a double function enzyme, which is able to use primary alcohols (C2-C6) and its respective aldehydes as alternate substrates. Moreover, the enzyme utilizes ethanol as a substrate in a reaction mechanism where this is subjected to a two-step oxidation process to produce acetic acid without releasing the acetaldehyde intermediary to the media. Moreover, we propose a mechanism that, under physiological conditions, might permit a massive conversion of ethanol to acetic acid, as usually occurs in the acetic acid bacteria, but without the transient accumulation of the highly toxic acetaldehyde.

Indexed as

AcetatesAlcohol DehydrogenaseAldehydesAmino Acid SequenceBiocatalysisCarbon RadioisotopesEthanolGas Chromatography-Mass SpectrometryGluconacetobacterIsotope LabelingKineticsMagnetic Resonance SpectroscopyMolecular Sequence DataOxidation-ReductionProtein DenaturationTemperatureAcetatesAlcohol DehydrogenaseAldehydesCarbon RadioisotopesEthanol

Identifiers

PMID25574602
PMCPMC4307304
OpenAlexW1989678589

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.