Evidence map›Paper›PMID 25572496›Full record

ArticleCurrent microbiology2015

The yeast BDF1 regulates endocytosis via LSP1 under salt stress.

Jiafang Fu, Jin Hou, Lei Chen, Mingpeng Wang, Yu Shen, Zhaojie Zhang, Xiaoming Bao

Abstract read
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In one paragraph

Article in Current microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Jiafang FuShandong Medicinal Biotechnology Centre, Shandong Academy of Medical Sciences, Jinan, 250062, China.
Jin Hou
Lei Chen
Mingpeng Wang
Yu Shen
Zhaojie Zhang
Xiaoming Bao
State Key Laboratory of Microbial TechnologyShandong First Medical University · CNShandong University · CNWyoming Department of Education · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bromodomain-containing transcription factor, a kind of important regulating protein, can recognize and bind to acetylated histone. The homologous genes, BDF1 and BDF2, in Saccharomyces cerevisiae, respectively, encode a bromodomain-containing transcription factor. Previously study has demonstrated that both BDF1 and BDF2 participate in yeast salt stress response. Bdf1p deletion cells are sensitive to salt stress and this phenotype is suppressed by its homologue BDF2 in a dosage-dependent manner. In this study, we show that the histone deacetylase SIR2 over-expression enhanced dosage-dependent compensation of BDF2. SIR2 over-expression induced a global transcription change, and 1959 gene was down-regulated. We deleted some of the most significant down-regulated genes and did the spot assay. The results revealed that LSP1, an upstream component of endocytosis pathway, and CIN5, a transcription factor that mediates cellular resistance to stresses, can enhance salt resistance of bdf1∆. Further analysis demonstrated that under salt stress the endocytosis is over-activated in bdf1∆ but was recovered in bdf1∆ lsp1∆. To our best knowledge, this is the first report that the transcription factor Bdf1p regulates endocytosis under salt stress via LSP1, a major component of eisosomes that regulate the sites of endocytosis.

Indexed as

EndocytosisStress, PhysiologicalBromodomain Containing ProteinsGene DeletionGene Expression ProfilingGene Expression Regulation, FungalGenetic Complementation TestPhosphoproteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSaltsSilent Information Regulator Proteins, Saccharomyces cerevisiaeSirtuin 2Transcription FactorsBDF1 protein, S cerevisiaeBromodomain Containing ProteinsLSP1 protein, S cerevisiaePhosphoproteinsSaccharomyces cerevisiae ProteinsSaltsSilent Information Regulator Proteins, Saccharomyces cerevisiaeSIR2 protein, S cerevisiaeSirtuin 2Transcription Factors

Identifiers

PMID25572496
OpenAlexW2089166023

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.