Evidence map›Paper›PMID 25572493›Full record

ArticleCurrent microbiology2015

Sec pathway influences the growth of Deinococcus radiodurans.

Liangyan Wang, Hongmei Tan, Kaiying Cheng, Mingfeng Li, Xin Xu, Jing Wang, Yuejin Hua

Abstract read
PubMed Publisher
In one paragraph

Article in Current microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Liangyan WangKey Laboratory for Nuclear-Agricultural Sciences of Chinese Ministry of Agriculture and Zhejiang Province, Institute of Nuclear-Agricultural Sciences, Zhejiang University, 268 Kaixuan Road, Hangzhou, 310029, Zhejiang, China.
Hongmei Tan
Kaiying Cheng
Mingfeng Li
Xin Xu
Jing Wang
Yuejin Hua
Zhejiang University · CNEnvironmental Protection Agency · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The release of extracellular DNA molecules (eDNA) contributes to various biological processes, such as biofilm formation, virulence, and stress tolerance. The quantity of eDNA released by bacteria is usually regulated by extracellular nucleases that are secreted by different systems. In this study, we show that high concentrations of eDNA inhibit the growth of two strains of Deinococcaceae, Deinococcus radiodurans, and Deinococcus radiopugnans, but have no effect on other selected organisms, such as Escherichia coli. In D. radiodurans, an extracellular nuclease was shown to be secreted through the Sec pathway. Disruption of one member of this pathway, SecD/F, inhibited cell growth, suggesting that the Sec pathway plays an important role in growth rate. However, the Sec pathway mutant exhibited a greater deficiency in growth rate compared with the extracellular nuclease mutant, indicating that the pathway not only secretes the extracellular nuclease, but has other unknown functions as well.

Indexed as

DeinococcusDeoxyribonucleasesDNA, BacterialEscherichia coliGene Knockout TechniquesMembrane Transport ProteinsMetabolic Networks and PathwaysDeoxyribonucleasesDNA, BacterialMembrane Transport Proteins

Identifiers

PMID25572493
OpenAlexW2090840160

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.