Evidence map›Paper›PMID 25569859›Full record

ArticleIET systems biology2015

Fundamental limitation of the instantaneous approximation in fold-change detection models.

Maja Skataric, Evgeni V Nikolaev, Eduardo D Sontag

Abstract read
In one paragraph

Article in IET systems biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. A synthetic synthesis to explore animal evolution and development.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Maja SkataricDepartment of Electrical and Computer Engineering, Rutgers University, Piscataway, NJ 08854-8019, USA.
Evgeni V NikolaevDepartment of Mathematics, Rutgers University, Piscataway, NJ 08854-8019, USA.
Eduardo D SontagDepartment of Mathematics, Rutgers University, Piscataway, NJ 08854-8019, USA. sontag@math.rutgers.edu.

Funding

Transient behaviors of adapting biological systemsR01GM100473 · NIGMS · RUTGERS, THE STATE UNIV OF N.J. · PI SONTAG, EDUARDO · 2011 to 2014
$1.6M
NIGMS NIH HHS 1R01GM100473NIGMS NIH HHS R01 GM100473
6 · The paper itself

Abstract

The phenomenon of fold-change detection, or scale-invariance, is exhibited by a variety of sensory systems, in both bacterial and eukaryotic signalling pathways. It has been often remarked in the systems biology literature that certain systems whose output variables respond at a faster time scale than internal components give rise to an approximate scale-invariant behaviour, allowing approximate fold-change detection in stimuli. This study establishes a fundamental limitation of such a mechanism, showing that there is a minimal fold-change detection error that cannot be overcome, no matter how large the separation of time scales is. To illustrate this theoretically predicted limitation, the authors discuss two common biomolecular network motifs, an incoherent feedforward loop and a feedback system, as well as a published model of the chemotaxis signalling pathway of Dictyostelium discoideum.

Indexed as

AlgorithmsModels, BiologicalAdaptation, PhysiologicalAnimalsComputer SimulationFeedback, PhysiologicalHumansSensation

Identifiers

PMID25569859
PMCPMC5653975

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.