Evidence map›Paper›PMID 25569357›Full record

ArticlePLoS genetics2015

Developmental regulation of the Tetrahymena thermophila origin recognition complex.

Po-Hsuen Lee, Xiangzhou Meng, Geoffrey M Kapler

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. ORChestra coordinates the replication and repair music.BioEssays : news and reviews in molecular, cellular and developmental biology · 2023
    Article
  3. Article
  4. Transcriptome analysis of the binucleate ciliateMolecular biology of the cell · 2023
    Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Origins of DNA replication.PLoS genetics · 2019
    Review
  10. Gene Expression inmBio · 2017
    Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Po-Hsuen LeeDepartment of Molecular and Cellular Medicine, Texas A&M University Health Science Center, College Station, Texas, United States of America.
Xiangzhou MengDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, Texas, United States of America.
Geoffrey M KaplerDepartment of Molecular and Cellular Medicine, Texas A&M University Health Science Center, College Station, Texas, United States of America; Department of Biochemistry and Biophysics, Texas A&M University, College Station, Texas, United States of America.
Texas A&M University · USTexas A&M Health Science Center · US

Funding

NIGMS NIH HHS 5R01GM053527
6 · The paper itself

Abstract

The Tetrahymena thermophila DNA replication machinery faces unique demands due to the compartmentalization of two functionally distinct nuclei within a single cytoplasm, and complex developmental program. Here we present evidence for programmed changes in ORC and MCM abundance that are not consistent with conventional models for DNA replication. As a starting point, we show that ORC dosage is critical during the vegetative cell cycle and development. A moderate reduction in Orc1p induces genome instability in the diploid micronucleus, aberrant division of the polyploid macronucleus, and failure to generate a robust intra-S phase checkpoint response. In contrast to yeast ORC2 mutants, replication initiation is unaffected; instead, replication forks elongation is perturbed, as Mcm6p levels decline in parallel with Orc1p. Experimentally induced down-regulation of ORC and MCMs also impairs endoreplication and gene amplification, consistent with essential roles during development. Unexpectedly Orc1p and Mcm6p levels fluctuate dramatically in developing wild type conjugants, increasing for early cycles of conventional micronuclear DNA replication and macronuclear anlagen replication (endoreplication phase I, rDNA gene amplification). This increase does not reflect the DNA replication load, as much less DNA is synthesized during this developmental window compared to vegetative S phase. Furthermore, although Orc1p levels transiently increase prior to endoreplication phase II, Orc1p and Mcm6p levels decline when the replication load increases and unconventional DNA replication intermediates are produced. We propose that replication initiation is re-programmed to meet different requirements or challenges during the successive stages of Tetrahymena development.

Indexed as

Cell CycleCell DivisionCell NucleusChromosomesDNA ReplicationDNA, RibosomalGene Expression Regulation, DevelopmentalGenomic InstabilityOrigin Recognition ComplexS PhaseTetrahymena thermophilaDNA, RibosomalOrigin Recognition Complex

Identifiers

PMID25569357
PMCPMC4287346
OpenAlexW2066853349

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.