Evidence map›Paper›PMID 25567987›Full record

ArticleNucleic acids research2015

A composite enhancer regulates p63 gene expression in epidermal morphogenesis and in keratinocyte differentiation by multiple mechanisms.

Dario Antonini, Anna Sirico, Edith Aberdam, Raffaele Ambrosio, Carmen Campanile, Sharmila Fagoonee, Fiorella Altruda, Daniel Aberdam, Janice L Brissette, Caterina Missero

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 34 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Super-enhancer-mediated core regulatory circuitry in human cancer.Computational and structural biotechnology journal · 2021
    Review
  9. Article
  10. Article
  11. Article
  12. Master regulatory role of p63 in epidermal development and disease.Cellular and molecular life sciences : CMLS · 2018
    Review
  13. Article
  14. Protein aggregation of the p63 transcription factor underlies severe skin fragility in AEC syndrome.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  15. Article
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 3 countries.

Dario AntoniniIRCCS SDN, Napoli, Italy.
Anna SiricoCEINGE Biotecnologie Avanzate, Napoli, Italy.
Edith AberdamINSERM UMR-S 976, Paris, France Université Paris-Diderot, Hopital St-Louis, Paris, France.
Raffaele AmbrosioIRCCS SDN, Napoli, Italy.
Carmen CampanileCEINGE Biotecnologie Avanzate, Napoli, Italy.
Sharmila FagooneeInstitute for Biostructures and Bioimages (CNR), c/o Molecular Biotechnology Center, University of Turin, Torino, Italy.
Fiorella AltrudaMolecular Biotechnology Center, Department of Molecular Biotechnology and Health Sciences, University of Turin, Torino, Italy.
Daniel AberdamINSERM UMR-S 976, Paris, France Université Paris-Diderot, Hopital St-Louis, Paris, France.
Janice L BrissetteDepartment of Cell Biology, State University of New York Downstate Medical Center, NY, USA.
Caterina MisseroCEINGE Biotecnologie Avanzate, Napoli, Italy Department of Biology, University of Naples Federico II, Napoli, Italy caterina.missero@unina.it.
Ceinge Biotecnologie Avanzate (Italy) · ITSDN Istituto di Ricerca Diagnostica e Nucleare · ITUniversité Paris Cité · FRUniversity of Turin · ITSUNY Downstate Health Sciences University · USUniversity of Naples Federico II · IT

Funding

Mouse nude locus and skin developmentR01AR045284 · NIAMS · SUNY DOWNSTATE MEDICAL CENTER · PI BRISSETTE, JANICE L · 1998 to 2013
$4.2M
Novel regulators of skin development and Foxn1 functionR01AR055218 · NIAMS · SUNY DOWNSTATE MEDICAL CENTER · PI BRISSETTE, JANICE L · 2008 to 2012
$1.8M
NIAMS NIH HHS AR045284NIAMS NIH HHS AR055218NIAMS NIH HHS R01 AR045284NIAMS NIH HHS R01 AR055218Telethon GGP12239
6 · The paper itself

Abstract

p63 is a crucial regulator of epidermal development, but its transcriptional control has remained elusive. Here, we report the identification of a long-range enhancer (p63LRE) that is composed of two evolutionary conserved modules (C38 and C40), acting in concert to control tissue- and layer-specific expression of the p63 gene. Both modules are in an open and active chromatin state in human and mouse keratinocytes and in embryonic epidermis, and are strongly bound by p63. p63LRE activity is dependent on p63 expression in embryonic skin, and also in the commitment of human induced pluripotent stem cells toward an epithelial cell fate. A search for other transcription factors involved in p63LRE regulation revealed that the CAAT enhancer binding proteins Cebpa and Cebpb and the POU domain-containing protein Pou3f1 repress p63 expression during keratinocyte differentiation by binding the p63LRE enhancer. Collectively, our data indicate that p63LRE is composed of additive and partly redundant enhancer modules that act to direct robust p63 expression selectively in the basal layer of the epidermis.

Indexed as

Enhancer Elements, GeneticGene Expression Regulation, DevelopmentalAnimalsCell DifferentiationCells, CulturedEpidermisHumansKeratinocytesMice, Inbred C57BLMorphogenesisPhosphoproteinsTrans-ActivatorsTranscriptional ActivationTranscription FactorsPhosphoproteinsTrans-ActivatorsTranscription FactorsTrp63 protein, mouse

Identifiers

PMID25567987
PMCPMC4333422
OpenAlexW1984690385

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.