Evidence map›Paper›PMID 25566987›Full record

ArticleHuman genetics2015

Interactions between household air pollution and GWAS-identified lung cancer susceptibility markers in the Female Lung Cancer Consortium in Asia (FLCCA).

H Dean Hosgood, Minsun Song, Chao Agnes Hsiung, Zhihua Yin, Xiao-Ou Shu, Zhaoming Wang, Nilanjan Chatterjee, Wei Zheng, Neil Caporaso, Laurie Burdette and 56 more

Open access · greenAbstract read
In one paragraph

Article in Human genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 6 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 6 pooled it
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 6 syntheses or guidelines pooled it, 44 citations in OpenAlex.

  1. Pooled it
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  7. Review
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  9. Article
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  15. Etiology of lung cancer: Evidence from epidemiologic studies.Journal of the National Cancer Center · 2022
    Review
  16. Article
  17. Lung cancer risk in never-smokers: An overview of environmental and genetic factors.Chinese journal of cancer research = Chung-kuo yen cheng yen chiu · 2021
    Article
  18. Article
  19. Impact of Gene-Environment Interactions on Cancer Development.International journal of environmental research and public health · 2020
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

66 authors at 20 institutions in 7 countries.

H Dean HosgoodDepartment of Epidemiology and Population Health, Albert Einstein College of Medicine, 1300 Morris Park Ave. Belfer 1309, 10461, Bronx, NY, USA, dean.hosgood@einstein.yu.edu.
Minsun Song
Chao Agnes Hsiung
Zhihua Yin
Xiao-Ou Shu
Zhaoming Wang
Nilanjan Chatterjee
Wei Zheng
Neil Caporaso
Laurie Burdette
Meredith Yeager
Sonja I Berndt
Maria Teresa Landi
Chien-Jen Chen
Gee-Chen Chang
Chin-Fu Hsiao
Ying-Huang Tsai
Li-Hsin Chien
Kuan-Yu Chen
Ming-Shyan Huang
Wu-Chou Su
Yuh-Min Chen
Chung-Hsing Chen
Tsung-Ying Yang
Chih-Liang Wang
Jen-Yu Hung
Chien-Chung Lin
Reury-Perng Perng
Chih-Yi Chen
Kun-Chieh Chen
Yao-Jen Li
Chong-Jen Yu
Yi-Song Chen
Ying-Hsiang Chen
Fang-Yu Tsai
Christopher Kim
Wei Jie Seow
Bryan A Bassig
Wei Wu
Peng Guan
Qincheng He
Yu-Tang Gao
Qiuyin Cai
Wong-Ho Chow
Yong-Bing Xiang
Dongxin Lin
Chen Wu
Yi-Long Wu
Min-Ho Shin
Yun-Chul Hong
Keitaro Matsuo
Kexin Chen
Maria Pik Wong
Dara Lu
Li Jin
Jiu-Cun Wang
Adeline Seow
Tangchun Wu
Hongbing Shen
Joseph F Fraumeni
Pan-Chyr Yang
I-Shou Chang
Baosen Zhou
Stephen J Chanock
Nathaniel Rothman
Qing Lan
National Cancer Institute · USNational Health Research Institutes · TWNational Institutes of Health · USChina Medical University · CNTaipei Veterans General Hospital · TWVanderbilt University Medical Center · USChinese Academy of Medical Sciences & Peking Union Medical College · CNGenomics Research Center, Academia Sinica · TWKaohsiung Medical University · TWNational Cheng Kung University Hospital · TWNational Taiwan University Hospital · TWShanghai Cancer Institute · CNState Key Laboratory of Genetic EngineeringTianjin Medical University Cancer Institute and Hospital · CNAlbert Einstein College of Medicine · USChang Gung Memorial Hospital · TWChiayi Chang Gung Memorial Hospital · TWChina Medical University · TWChinese University of Hong Kong · CNChonnam National University · KR

Funding

Shanghai Womens Health StudyUM1CA182910 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI ZHENG, WEI · 2014 to 2018
$5.9M
Intramural NIH HHSNCI NIH HHS UM1 CA182910
6 · The paper itself

Abstract

We previously carried out a multi-stage genome-wide association study (GWAS) on lung cancer among never smokers in the Female Lung Cancer Consortium in Asia (FLCCA) (6,609 cases, 7,457 controls) that identified novel susceptibility loci at 10q25.2, 6q22.2, and 6p21.32, and confirmed two previously identified loci at 5p15.33 and 3q28. Household air pollution (HAP) attributed to solid fuel burning for heating and cooking, is the leading cause of the overall disease burden in Southeast Asia, and is known to contain lung carcinogens. To evaluate the gene-HAP interactions associated with lung cancer in loci independent of smoking, we analyzed data from studies participating in FLCCA with fuel use information available (n = 3; 1,731 cases; 1,349 controls). Coal use was associated with a 30% increased risk of lung cancer (OR 1.3, 95% CI 1.0-1.6). Among the five a priori SNPs identified by our GWAS, two showed a significant interaction with coal use (HLA Class II rs2395185, p = 0.02; TP63 rs4488809 (rs4600802), p = 0.04). The risk of lung cancer associated with coal exposure varied with the respective alleles for these two SNPs. Our observations provide evidence that genetic variation in HLA Class II and TP63 may modify the association between HAP and lung cancer risk. The roles played in the cell cycle and inflammation pathways by the proteins encoded by these two genes provide biological plausibility for these interactions; however, additional replication studies are needed in other non-smoking populations.

Indexed as

AdenocarcinomaAdultAgedAir PollutantsAir Pollution, IndoorCase-Control StudiesFemaleGene-Environment InteractionGenetic MarkersGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansLung NeoplasmsMiddle AgedPolymorphism, Single NucleotideRiskAir PollutantsGenetic Markers

Identifiers

PMID25566987
PMCPMC5537621
OpenAlexW2094979780

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.