Evidence map›Paper›PMID 25566884›Full record

ArticleJournal of the Royal Society, Interface2015

Crystal growth of bullet-shaped magnetite in magnetotactic bacteria of the Nitrospirae phylum.

Jinhua Li, Nicolas Menguy, Christophe Gatel, Victor Boureau, Etienne Snoeck, Gilles Patriarche, Eric Leroy, Yongxin Pan

Open access · greenAbstract read
In one paragraph

Article in Journal of the Royal Society, Interface, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 67 citations in OpenAlex.

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  16. Phylogenetic and Structural Identification of a Novel MagnetotacticApplied and environmental microbiology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Jinhua LiPaleomagnetism and Geochronology Lab, Key Laboratory of Earth and Planetary Physics, Institute of Geology and Geophysics, Chinese Academy of Sciences, Beijing 100029, People's Republic of China Institut de Minéralogie, de Physique des Matériaux, et de Cosmochimie (IMPMC), Sorbonne Universités-UPMC Univ Paris 06, UMR CNRS 7590, Muséum National d'Histoire Naturelle (MNHN), IRD UMR 206, 4 Place Jussieu, Paris 75005, France France-China Biomineralization and Nano-structures Laboratory, Chinese Academy of Sciences, Beijing 100029, People's Republic of China lijinhua@mail.iggcas.ac.cn.
Nicolas MenguyInstitut de Minéralogie, de Physique des Matériaux, et de Cosmochimie (IMPMC), Sorbonne Universités-UPMC Univ Paris 06, UMR CNRS 7590, Muséum National d'Histoire Naturelle (MNHN), IRD UMR 206, 4 Place Jussieu, Paris 75005, France nicolas.menguy@upmc.fr.
Christophe GatelCEMES/CNRS; BP 94347, Toulouse Cedex 31055, France.
Victor BoureauCEMES/CNRS; BP 94347, Toulouse Cedex 31055, France.
Etienne SnoeckCEMES/CNRS; BP 94347, Toulouse Cedex 31055, France.
Gilles PatriarcheLPN-UPR20/CNRS, Route de Nozay, Marcoussis 91460, France.
Eric LeroyFrance Chimie Métallurgique des Terres Rares, ICMPE, UMR 7182, CNRS, 2-8 rue Henri Dunant, Thiais Cedex 94320, France.
Yongxin PanPaleomagnetism and Geochronology Lab, Key Laboratory of Earth and Planetary Physics, Institute of Geology and Geophysics, Chinese Academy of Sciences, Beijing 100029, People's Republic of China France-China Biomineralization and Nano-structures Laboratory, Chinese Academy of Sciences, Beijing 100029, People's Republic of China yxpan@mail.iggcas.ac.cn.
Centre National de la Recherche Scientifique · FRChinese Academy of Sciences · CNInstitut de Chimie et des Matériaux Paris-Est · FRInstitute of Geology and Geophysics · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Magnetotactic bacteria (MTB) are known to produce single-domain magnetite or greigite crystals within intracellular membrane organelles and to navigate along the Earth's magnetic field lines. MTB have been suggested as being one of the most ancient biomineralizing metabolisms on the Earth and they represent a fundamental model of intracellular biomineralization. Moreover, the determination of their specific crystallographic signature (e.g. structure and morphology) is essential for palaeoenvironmental and ancient-life studies. Yet, the mechanisms of MTB biomineralization remain poorly understood, although this process has been extensively studied in several cultured MTB strains in the Proteobacteria phylum. Here, we show a comprehensive transmission electron microscopy (TEM) study of magnetic and structural properties down to atomic scales on bullet-shaped magnetites produced by the uncultured strain MYR-1 belonging to the Nitrospirae phylum, a deeply branching phylogenetic MTB group. We observed a multiple-step crystal growth of MYR-1 magnetite: initial isotropic growth forming cubo-octahedral particles (less than approx. 40 nm), subsequent anisotropic growth and a systematic final elongation along [001] direction. During the crystal growth, one major {111} face is well developed and preserved at the larger basal end of the crystal. The basal {111} face appears to be terminated by a tetrahedral-octahedral-mixed iron surface, suggesting dimensional advantages for binding protein(s), which may template the crystallization of magnetite. This study offers new insights for understanding magnetite biomineralization within the Nitrospirae phylum.

Indexed as

CrystallizationElectron Microscope TomographyFerrosoferric OxideProteobacteriaFerrosoferric Oxidebiomineralizationbullet-shaped magnetitecrystal growthmagnetotactic bacteriamicromagnetic propertyNitrospirae phylum

Identifiers

PMID25566884
PMCPMC4305428
OpenAlexW2108879695

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.