Evidence map›Paper›PMID 25566286›Full record

ArticleFrontiers in plant science2014

The poplar Phi class glutathione transferase: expression, activity and structure of GSTF1.

Henri Pégeot, Cha San Koh, Benjamin Petre, Sandrine Mathiot, Sébastien Duplessis, Arnaud Hecker, Claude Didierjean, Nicolas Rouhier

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 44 citations in OpenAlex.

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  3. Robust AMBER Force Field Parameters for Glutathionylated Cysteines.International journal of molecular sciences · 2023
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  8. The GlutathioneInternational journal of molecular sciences · 2022
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  12. Review
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  14. Review
  15. Expression of barleyPlant biotechnology (Tokyo, Japan) · 2018
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  16. Article
  17. Structural evidence forFEBS open bio · 2017
    Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Henri PégeotInteractions Arbres - Microorganismes, Université de Lorraine, UMR1136 Vandoeuvre-lès-Nancy, France ; INRA, Interactions Arbres - Microorganismes, UMR1136 Champenoux, France.
Cha San KohFaculté des Sciences et Technologies, Université de Lorraine, CRM2, Equipe BioMod, UMR 7036 Vandoeuvre-lès-Nancy, France ; Faculté des Sciences et Technologies, CNRS, CRM2, Equipe BioMod, UMR 7036 Vandoeuvre-lès-Nancy, France.
Benjamin PetreInteractions Arbres - Microorganismes, Université de Lorraine, UMR1136 Vandoeuvre-lès-Nancy, France ; INRA, Interactions Arbres - Microorganismes, UMR1136 Champenoux, France.
Sandrine MathiotFaculté des Sciences et Technologies, Université de Lorraine, CRM2, Equipe BioMod, UMR 7036 Vandoeuvre-lès-Nancy, France ; Faculté des Sciences et Technologies, CNRS, CRM2, Equipe BioMod, UMR 7036 Vandoeuvre-lès-Nancy, France.
Sébastien DuplessisInteractions Arbres - Microorganismes, Université de Lorraine, UMR1136 Vandoeuvre-lès-Nancy, France ; INRA, Interactions Arbres - Microorganismes, UMR1136 Champenoux, France.
Arnaud HeckerInteractions Arbres - Microorganismes, Université de Lorraine, UMR1136 Vandoeuvre-lès-Nancy, France ; INRA, Interactions Arbres - Microorganismes, UMR1136 Champenoux, France.
Claude DidierjeanFaculté des Sciences et Technologies, Université de Lorraine, CRM2, Equipe BioMod, UMR 7036 Vandoeuvre-lès-Nancy, France ; Faculté des Sciences et Technologies, CNRS, CRM2, Equipe BioMod, UMR 7036 Vandoeuvre-lès-Nancy, France.
Nicolas RouhierInteractions Arbres - Microorganismes, Université de Lorraine, UMR1136 Vandoeuvre-lès-Nancy, France ; INRA, Interactions Arbres - Microorganismes, UMR1136 Champenoux, France.
Institut National de la Recherche Agronomique · MACentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glutathione transferases (GSTs) constitute a superfamily of enzymes with essential roles in cellular detoxification and secondary metabolism in plants as in other organisms. Several plant GSTs, including those of the Phi class (GSTFs), require a conserved catalytic serine residue to perform glutathione (GSH)-conjugation reactions. Genomic analyses revealed that terrestrial plants have around ten GSTFs, eight in the Populus trichocarpa genome, but their physiological functions and substrates are mostly unknown. Transcript expression analyses showed a predominant expression of all genes both in reproductive (female flowers, fruits, floral buds) and vegetative organs (leaves, petioles). Here, we show that the recombinant poplar GSTF1 (PttGSTF1) possesses peroxidase activity toward cumene hydroperoxide and GSH-conjugation activity toward model substrates such as 2,4-dinitrochlorobenzene, benzyl and phenetyl isothiocyanate, 4-nitrophenyl butyrate and 4-hydroxy-2-nonenal but interestingly not on previously identified GSTF-class substrates. In accordance with analytical gel filtration data, crystal structure of PttGSTF1 showed a canonical dimeric organization with bound GSH or 2-(N-morpholino)ethanesulfonic acid molecules. The structure of these protein-substrate complexes allowed delineating the residues contributing to both the G and H sites that form the active site cavity. In sum, the presence of GSTF1 transcripts and proteins in most poplar organs especially those rich in secondary metabolites such as flowers and fruits, together with its GSH-conjugation activity and its documented stress-responsive expression suggest that its function is associated with the catalytic transformation of metabolites and/or peroxide removal rather than with ligandin properties as previously reported for other GSTFs.

Indexed as

crystallographyenzyme characterizationglutathione transferasePopulusprotein structuretranscript profiling

Identifiers

PMID25566286
PMCPMC4274894
OpenAlexW2006815694

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.