Evidence map›Paper›PMID 25564798›Full record

ArticleProtein science : a publication of the Protein Society2015

Inherent dynamics within the Crimean-Congo Hemorrhagic fever virus protease are localized to the same region as substrate interactions.

Elan Z Eisenmesser, Glenn C Capodagli, Geoffrey S Armstrong, Michael J Holliday, Nancy G Isern, Fengli Zhang, Scott D Pegan

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Elan Z EisenmesserDepartment of Biochemistry and Molecular Genetics, School of Medicine, University of Colorado Denver, Aurora, Colorado, 80224.
Glenn C Capodagli
Geoffrey S Armstrong
Michael J Holliday
Nancy G Isern
Fengli Zhang
Scott D Pegan
University of Colorado Denver · USUniversity of Georgia · USEnvironmental Molecular Sciences Laboratory · USNational High Magnetic Field Laboratory · USUniversity of Colorado Boulder · US

Funding

Purchase of 900 MHz NMR SpectrometerP41GM068928 · NIGMS · UNIVERSITY OF COLORADO AT BOULDER · PI WUTTKE, DEBORAH S. · 2003 to 2009
$6.4M
Origin of the innate immunity suppression caused by nairovirus' protease activityR01AI109008 · NIAID · UNIVERSITY OF GEORGIA · PI PEGAN, SCOTT DUSAN · 2014 to 2018
$1.6M
Combining chemical shift-based and experimental approaches to study enzyme dynamiR01GM107262 · NIGMS · UNIVERSITY OF COLORADO DENVER · PI EISENMESSER, ELAN Z · 2014 to 2017
$1.2M
Molecular probes for a vOTU from CCHFV using a fluorogenic peptideR03MH097507 · NIMH · UNIVERSITY OF GEORGIA · PI PEGAN, SCOTT DUSAN · 2012 to 2013
$73k
Mapping and controlling the segmental dynamic networks of Cyclophilin A as they relate to enzymatic functionF31CA183206 · NCI · UNIVERSITY OF COLORADO DENVER · PI HOLLIDAY, MICHAEL JOSEPH · 2014 to 2015
$41k
NCI NIH HHS 1F31CA183206-01A1NCI NIH HHS F31 CA183206NIAID NIH HHS R01 AI109008NIGMS NIH HHS GM107262-01A1NIGMS NIH HHS GM68928NIGMS NIH HHS R01 GM107262NIMH NIH HHS 1R03MH097507-01A1NIMH NIH HHS R03 MH097507PHS HHS 1R01AL109008-01
6 · The paper itself

Abstract

Crimean-Congo Hemorrhagic fever virus (CCHFV) is one of several lethal viruses that encodes for a viral ovarian tumor domain (vOTU), which serves to cleave and remove ubiquitin (Ub) and interferon stimulated gene product 15 (ISG15) from numerous proteins involved in cellular signaling. Such manipulation of the host cell machinery serves to downregulate the host response and, therefore, complete characterization of these proteases is important. While several structures of the CCHFV vOTU protease have been solved, both free and bound to Ub and ISG15, few structural differences have been found and little insight has been gained as to the structural plasticity of this protease. Therefore, we have used NMR relaxation experiments to probe the dynamics of CCHFV vOTU, both alone and in complex with Ub, discovering a highly dynamic protease that exhibits conformational exchange within the same regions found to engage its Ub substrate. These experiments reveal a structural plasticity around the N-terminal regions of CCHFV vOTU, which are unique to vOTUs, and provide a rationale for engaging multiple substrates with the same binding site.

Indexed as

Protein Structure, TertiaryBinding SitesCrystallography, X-RayHemorrhagic Fever, CrimeanHemorrhagic Fever Virus, Crimean-CongoHumansNuclear Magnetic Resonance, BiomolecularPeptide HydrolasesSubstrate SpecificityUbiquitinPeptide HydrolasesUbiquitinCCHFVprotein dynamicsprotein-protein interactionsvOTU

Identifiers

PMID25564798
PMCPMC4420516
OpenAlexW1954737979

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.