ArticleJournal of industrial microbiology & biotechnology2015
Comparative transcriptomic analysis reveals novel genes and regulatory mechanisms of Tetragenococcus halophilus in response to salt stress.
Article in Journal of industrial microbiology & biotechnology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.
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Who cites it
21 citing papers in PubMed, 62 citations in OpenAlex.
- A Halophilic Bacterium for Bioremediation of Saline-Alkali Land: The Triadic and Synergetic Response Mechanism ofMicroorganisms · 2025Article
- Growth, physiology, and metabolism ofFrontiers in microbiology · 2025Article
- Effect and potential mechanism of nitrite reductase B on nitrite degradation byCurrent research in food science · 2024Article
- Genome-wide transcriptome profiling reveals molecular response pathways ofFrontiers in microbiology · 2024Article
- Monitoring the growth dynamics of Tetragenococcus halophilus strains in lupine moromi fermentation using a multiplex-PCR system.BMC research notes · 2023Article
- SIRT1 activation attenuates microglia-mediated synaptic engulfment in postoperative cognitive dysfunction.Frontiers in aging neuroscience · 2022Article
- Genome-Resolved Metaproteomic Analysis of Microbiota and Metabolic Pathways Involved in Taste Formation During Chinese Traditional Fish Sauce (Yu-lu) Fermentation.Frontiers in nutrition · 2022Article
- Evaluating the effect of lactic acid bacterial fermentation on salted soy whey for development of a potential novel soy sauce-like condiment.Current research in food science · 2022Article
- The diversity among the species Tetragenococcus halophilus including new isolates from a lupine seed fermentation.BMC microbiology · 2021Article
- Effects of CcpA against salt stress in Lactiplantibacillus plantarum as assessed by comparative transcriptional analysis.Applied microbiology and biotechnology · 2021Article
- Characterization of DinJ-YafQ toxin-antitoxin module in Tetragenococcus halophilus: activity, interplay, and evolution.Applied microbiology and biotechnology · 2021Article
- Revealing the salinity adaptation mechanism in halotolerant bacterium Egicoccus halophilus EGI 80432Applied microbiology and biotechnology · 2021Article
- NNature communications · 2019Article
- Glycine betaine enhances biodegradation of phenol in high saline environments by the halophilic strainRSC advances · 2019Article
- Hypo-phosphorylated CD147 promotes migration and invasion of hepatocellular carcinoma cells and predicts a poor prognosis.Cellular oncology (Dordrecht, Netherlands) · 2019Article
- Intra-tumor heterogeneity for endometrial cancer and its clinical significance.Chinese medical journal · 2019Article
- Identification of a GntR family regulator BusRExtremophiles : life under extreme conditions · 2019Article
- Identification of cucumber circular RNAs responsive to salt stress.BMC plant biology · 2019Article
- Genome Sequencing ofFrontiers in microbiology · 2019Article
- Transcriptomic Analysis ofFrontiers in microbiology · 2017Article
Corrections and comments
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Authors and funding
4 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Tetragenococcus halophilus, a moderately halophilic Gram-positive bacterium, was isolated from Chinese style soy sauce. This species is a valuable resource for investigating salt tolerance mechanisms and improving salinity resistance in microorganisms. RNA-seq was used to sequence T. halophilus samples treated with 0 M (T1), 1 M (T2), and 3.5 M NaCl (T3). Comparative transcriptomic analyses of the different treatments were performed using gene ontology and Kyoto encyclopedia of genes and genome. The comparison of T1 and T2 by RNA-seq revealed that genes involved in transcription, translation, membrane system, and division were highly up-regulated under optimum salt condition. The comparison of T2 and T3 showed that genes related to heat shock proteins or the ATP-binding cassette transport systems were significantly up-regulated under maximum-salt condition. In addition, a considerable proportion of the significantly differently expressed genes identified in this study are novel. These data provide a crucial resource that may determine specific responses to salt stress in T. halophilus.
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