Evidence map›Paper›PMID 25562107›Full record

ArticleAmerican journal of respiratory and critical care medicine2015

Genome-wide association study of short-acting β2-agonists. A novel genome-wide significant locus on chromosome 2 near ASB3.

Elliot Israel, Jessica Lasky-Su, Amy Markezich, Amy Damask, Stanley J Szefler, Brooke Schuemann, Barbara Klanderman, Jody Sylvia, Shamsah Kazani, Rongling Wu and 7 more

Abstract read
In one paragraph

Article in American journal of respiratory and critical care medicine, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Trial
  3. Trial
  4. Pharmacogenetics of childhood uncontrolled asthma.Expert review of clinical immunology · 2025
    Review
  5. Article
  6. Article
  7. Article
  8. Heterogeneity of Treatment Response to Asthma.Advances in experimental medicine and biology · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Pharmacogenetics of Pediatric Asthma: Current Perspectives.Pharmacogenomics and personalized medicine · 2020
    Review
  15. Article
  16. Advances in asthma and allergic disease genetics: Is bigger always better?The Journal of allergy and clinical immunology · 2019
    Review
  17. Lessons Learned From GWAS of Asthma.Allergy, asthma & immunology research · 2019
    Review
  18. Whole-Genome Sequencing of Pharmacogenetic Drug Response in Racially Diverse Children with Asthma.American journal of respiratory and critical care medicine · 2018
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors.

Elliot Israel1 Division of Pulmonary and Critical Care Medicine and.
Jessica Lasky-Su
Amy Markezich
Amy Damask
Stanley J Szefler
Brooke Schuemann
Barbara Klanderman
Jody Sylvia
Shamsah Kazani
Rongling Wu
Fernando Martinez
Homer A Boushey
Vernon M Chinchilli
Dave Mauger
Scott T Weiss
Kelan G Tantisira
SHARP Investigators

Funding

Informatics for Integrating Biology/ the Bedside (RMI)U54LM008748 · NLM · BRIGHAM AND WOMEN'S HOSPITAL · PI KOHANE, ISAAC S. · 2004 to 2013
$39.0M
THE PHARMACOGENETICS OF ASTHMA TREATMENTU01HL065899 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI TANTISIRA, KELAN G, WEISS, SCOTT T · 2000 to 2014
$38.5M
PEDIATRIC ASTHMA NETWORK DATA COORDINATING CENTERU10HL064313 · NHLBI · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI MAUGER, DAVID T. · 1999 to 2008
$18.3M
ACRN Data Coordinating CenterU10HL074231 · NHLBI · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI CHINCHILLI, VERNON M. · 2003 to 2007
$13.3M
CHILDHOOD ASTHMA: EARLY PREVENTION AND PHARMACOGENETICSU10HL064307 · NHLBI · UNIVERSITY OF ARIZONA · PI MARTINEZ, FERNANDO D · 1999 to 2008
$9.0M
EARLY INTERVENTION IN CHILDHOOD ASTHMAU10HL064288 · NHLBI · NATIONAL JEWISH HEALTH · PI SZEFLER, STANLEY J. · 1999 to 2008
$6.7M
CHILDHOOD ASTHMA: INITIATION AND INTERVENTIONU10HL064305 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI LEMANSKE, ROBERT F · 1999 to 2008
$5.8M
PEDIATRIC ASTHMA CLINICAL RESEARCH NETWORK-CLINICAL CTRU10HL064287 · NHLBI · WASHINGTON UNIVERSITY · PI STRUNK, ROBERT · 1999 to 2008
$5.6M
AsthmaNet: Brigham and Women's Hospital & Children's Hospital BostonU10HL098102 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI ISRAEL, ELLIOT, PHIPATANAKUL, WANDA · 2009 to 2015
$5.5M
ASTHMA NETWORK DATA COORDINATING CENTERU10HL051845 · NHLBI · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI CHINCHILLI, VERNON M. · 1993 to 2002
$5.1M
CAMPCS/3U01HL075408 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI TONASCIA, JAMES A · 2003 to 2010
$4.9M
CHILDHOOD ASTHMA PREVENTION STUDY (CAPS) FOR PACRNU10HL064295 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ZEIGER, ROBERT S · 1999 to 2008
$4.4M
NHLBI NIH HHS R01 HL092197NHLBI NIH HHS U01 HL065899NHLBI NIH HHS U01 HL075232NHLBI NIH HHS U01 HL075408NHLBI NIH HHS U01 HL075409NHLBI NIH HHS U01 HL075415NHLBI NIH HHS U01 HL075416NHLBI NIH HHS U01 HL075417NHLBI NIH HHS U01 HL075419NHLBI NIH HHS U01 HL075420NHLBI NIH HHS U01 HL64313NHLBI NIH HHS U01 HL65899NHLBI NIH HHS U01HL65899NHLBI NIH HHS U01 HL75232NHLBI NIH HHS U01 HL75408NHLBI NIH HHS U01 HL75409NHLBI NIH HHS U01 HL75415NHLBI NIH HHS U01 HL75416NHLBI NIH HHS U01 HL75417NHLBI NIH HHS U01 HL75419NHLBI NIH HHS U01 HL75420NHLBI NIH HHS U10 HL051823NHLBI NIH HHS U10 HL051831NHLBI NIH HHS U10 HL051834NHLBI NIH HHS U10 HL051843NHLBI NIH HHS U10 HL051845NHLBI NIH HHS U10 HL056443NHLBI NIH HHS U10 HL064287NHLBI NIH HHS U10 HL064288NHLBI NIH HHS U10 HL064295NHLBI NIH HHS U10 HL064305NHLBI NIH HHS U10 HL064307NHLBI NIH HHS U10 HL064313NHLBI NIH HHS U10 HL074231NHLBI NIH HHS U10 HL098102NHLBI NIH HHS U10 HL51810NHLBI NIH HHS U10HL51823NHLBI NIH HHS U10 HL51831NHLBI NIH HHS U10 HL51834NHLBI NIH HHS U10 HL51843NHLBI NIH HHS U10 HL51845NHLBI NIH HHS U10 HL56443NHLBI NIH HHS U10HL64287NHLBI NIH HHS U10 HL64288NHLBI NIH HHS U10 HL64295NHLBI NIH HHS U10 HL64305NHLBI NIH HHS U10 HL64307NHLBI NIH HHS U10 HL74231NINR NIH HHS R01 NR013391NLM NIH HHS U54 LM008748NLM NIH HHS U54LM8748
6 · The paper itself

Abstract

rationaleβ2-Agonists are the most common form of treatment of asthma, but there is significant variability in response to these medications. A significant proportion of this responsiveness may be heritable.

objectivesTo investigate whether a genome-wide association study (GWAS) could identify novel pharmacogenetic loci in asthma.

methodsWe performed a GWAS of acute bronchodilator response (BDR) to inhaled β2-agonists. A total of 444,088 single-nucleotide polymorphisms (SNPs) were examined in 724 individuals from the SNP Health Association Resource (SHARe) Asthma Resource Project (SHARP). The top 50 SNPs were carried forward to replication in a population of 444 individuals. MEASUREMENTS AND MAIN

resultsThe combined P value for four SNPs reached statistical genome-wide significance aftercorrecting for multiple comparisons. Combined P values for rs350729, rs1840321, rs1384918, and rs1319797 were 2.21 × 10(-10), 5.75 × 10(-8), 9.3 × 10(-8), and 3.95 × 10(-8), respectively. The significant variants all map to a novel genetic region on chromosome 2 near the ASB3 gene, a region associated with smooth muscle proliferation. As compared with the wild type, the presence of the minor alleles reduced the degree of BDR by 20% in the original population and by a similar percentage in the confirmatory population.

conclusionsThese GWAS findings for BDR in subjects with asthma suggest that a gene associated with smooth muscle proliferation may influence a proportion of the smooth muscle relaxation that occurs in asthma.

Indexed as

Genome-Wide Association StudyAdrenergic beta-2 Receptor AgonistsAnkyrin RepeatAsthmaBronchodilator AgentsChildChild, PreschoolChromosomes, Human, Pair 2FemaleGene FrequencyGenotyping TechniquesHumansMaleMuscle, SmoothPhenotypePolymorphism, Single NucleotideADRB2 protein, humanAdrenergic beta-2 Receptor AgonistsASB3 protein, humanBronchodilator AgentsReceptors, Adrenergic, beta-2Suppressor of Cytokine Signaling Proteinsbronchodilatorgenotypesingle-nucleotide polymorphism

Identifiers

PMID25562107
PMCPMC4384768

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.