Evidence map›Paper›PMID 25561730›Full record

ArticleThe Journal of biological chemistry2015

Ligand binding pocket formed by evolutionarily conserved residues in the glucagon-like peptide-1 (GLP-1) receptor core domain.

Mi Jin Moon, Yoo-Na Lee, Sumi Park, Arfaxad Reyes-Alcaraz, Jong-Ik Hwang, Robert Peter Millar, Han Choe, Jae Young Seong

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 25 citations in OpenAlex.

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  5. Glucagon-like peptide 1 (GLP-1).Molecular metabolism · 2019 · on this map
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Mi Jin MoonFrom the Graduate School of Medicine, Korea University, Seoul 136-705, Republic of Korea.
Yoo-Na LeeFrom the Graduate School of Medicine, Korea University, Seoul 136-705, Republic of Korea.
Sumi ParkFrom the Graduate School of Medicine, Korea University, Seoul 136-705, Republic of Korea.
Arfaxad Reyes-AlcarazFrom the Graduate School of Medicine, Korea University, Seoul 136-705, Republic of Korea.
Jong-Ik HwangFrom the Graduate School of Medicine, Korea University, Seoul 136-705, Republic of Korea.
Robert Peter MillarMammal Research Institute, Department of Zoology and Entomology, University of Pretoria, Pretoria 0028, Medical Research Council Receptor Biology Unit, and University of Cape Town, Cape Town 7925, South Africa, and Centre for Integrative Physiology, University of Edinburgh, Edinburgh EH164TJ, Scotland, and.
Han ChoeDepartment of Physiology and Bio-Medical Institute of Technology, University of Ulsan College of Medicine, Seoul 138-736, Korea hchoe@ulsan.ac.kr.
Jae Young SeongFrom the Graduate School of Medicine, Korea University, Seoul 136-705, Republic of Korea, jyseong@korea.ac.kr.
Korea University · KRUniversity of Pretoria · ZAUniversity of Ulsan · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glucagon-like peptide-1 (GLP-1) plays a pivotal role in glucose homeostasis through its receptor GLP1R. Due to its multiple beneficial effects, GLP-1 has gained great attention for treatment of type 2 diabetes and obesity. However, little is known about the molecular mechanism underlying the interaction of GLP-1 with the heptahelical core domain of GLP1R conferring high affinity ligand binding and ligand-induced receptor activation. Here, using chimeric and point-mutated GLP1R, we determined that the evolutionarily conserved amino acid residue Arg(380) flanked by hydrophobic Leu(379) and Phe(381) in extracellular loop 3 (ECL3) may have an interaction with Asp(9) and Gly(4) of the GLP-1 peptide. The molecular modeling study showed that Ile(196) at transmembrane helix 2, Met(233) at ECL1, and Asn(302) at ECL2 of GLP1R have contacts with His(1) and Thr(7) of GLP-1. This study may shed light on the mechanism underlying high affinity interaction between the ligand and the binding pocket that is formed by these conserved residues in the GLP1R core domain.

Indexed as

Protein Structure, TertiaryAmino AcidsAmino Acid SequenceBinding SitesConserved SequenceEvolution, MolecularGlucagon-Like Peptide 1Glucagon-Like Peptide-1 ReceptorHEK293 CellsHumansLigandsModels, MolecularMolecular Sequence DataPeptidesPoint MutationProtein BindingAmino AcidsGLP1R protein, humanGlucagon-Like Peptide 1Glucagon-Like Peptide-1 ReceptorLigandsPeptidesReceptors, GlucagonDiabetesEvolutionGLP-1GLP1RG Protein-coupled Receptor (GPCR)Ligand SelectivityMolecular ModelingSignaling

Identifiers

PMID25561730
PMCPMC4342481
OpenAlexW2158181170

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.