Evidence map›Paper›PMID 25561717›Full record

ArticleJournal of bacteriology2015

Biosynthesis of cell envelope-associated phenolic glycolipids in Mycobacterium marinum.

Olivia Vergnolle, Sivagami Sundaram Chavadi, Uthamaphani R Edupuganti, Poornima Mohandas, Catherine Chan, Julie Zeng, Mykhailo Kopylov, Nicholas G Angelo, J David Warren, Clifford E Soll and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
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  4. Article
  5. Review
  6. High-Throughput Screen for Cell Wall Synthesis Network Module inFrontiers in bioengineering and biotechnology · 2020
    Article
  7. Article
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Olivia VergnolleDepartment of Biology, Brooklyn College, City University of New York, Brooklyn, New York, USA.
Sivagami Sundaram ChavadiDepartment of Biology, Brooklyn College, City University of New York, Brooklyn, New York, USA.
Uthamaphani R EdupugantiDepartment of Biology, Brooklyn College, City University of New York, Brooklyn, New York, USA.
Poornima MohandasDepartment of Biology, Brooklyn College, City University of New York, Brooklyn, New York, USA Graduate Center, City University of New York, New York, New York, USA.
Catherine ChanDepartment of Biology, Brooklyn College, City University of New York, Brooklyn, New York, USA.
Julie ZengDepartment of Biology, Brooklyn College, City University of New York, Brooklyn, New York, USA.
Mykhailo KopylovDepartment of Biology, Brooklyn College, City University of New York, Brooklyn, New York, USA.
Nicholas G AngeloDepartment of Biochemistry and Milstein Chemistry Core Facility, Weill Cornell Medical College, New York, New York, USA.
J David WarrenDepartment of Biochemistry and Milstein Chemistry Core Facility, Weill Cornell Medical College, New York, New York, USA.
Clifford E SollDepartment of Chemistry, Hunter College, City University of New York, New York, New York, USA.
Luis E N QuadriDepartment of Biology, Brooklyn College, City University of New York, Brooklyn, New York, USA Graduate Center, City University of New York, New York, New York, USA LQuadri@brooklyn.cuny.edu.
Brooklyn College · USCity University of New York · USCornell University · USHunter College · US

Funding

BIOSYNTHESIS OF MYCOBACTERIAL DIMYCOCEROSATE ESTER VIRULENCE FACTORSR15AI105884 · NIAID · BROOKLYN COLLEGE · PI QUADRI, LUIS E · 2014 to 2014
$431k
NIAID NIH HHS R15AI10588NIAID NIH HHS R15 AI105884
6 · The paper itself

Abstract

Phenolic glycolipids (PGLs) are polyketide synthase-derived glycolipids unique to pathogenic mycobacteria. PGLs are found in several clinically relevant species, including various Mycobacterium tuberculosis strains, Mycobacterium leprae, and several nontuberculous mycobacterial pathogens, such as M. marinum. Multiple lines of investigation implicate PGLs in virulence, thus underscoring the relevance of a deep understanding of PGL biosynthesis. We report mutational and biochemical studies that interrogate the mechanism by which PGL biosynthetic intermediates (p-hydroxyphenylalkanoates) synthesized by the iterative polyketide synthase Pks15/1 are transferred to the noniterative polyketide synthase PpsA for acyl chain extension in M. marinum. Our findings support a model in which the transfer of the intermediates is dependent on a p-hydroxyphenylalkanoyl-AMP ligase (FadD29) acting as an intermediary between the iterative and the noniterative synthase systems. Our results also establish the p-hydroxyphenylalkanoate extension ability of PpsA, the first-acting enzyme of a multisubunit noniterative polyketide synthase system. Notably, this noniterative system is also loaded with fatty acids by a specific fatty acyl-AMP ligase (FadD26) for biosynthesis of phthiocerol dimycocerosates (PDIMs), which are nonglycosylated lipids structurally related to PGLs. To our knowledge, the partially overlapping PGL and PDIM biosynthetic pathways provide the first example of two distinct, pathway-dedicated acyl-AMP ligases loading the same type I polyketide synthase system with two alternate starter units to produce two structurally different families of metabolites. The studies reported here advance our understanding of the biosynthesis of an important group of mycobacterial glycolipids.

Indexed as

Acyl Carrier ProteinBacterial ProteinsCell MembraneGene Expression Regulation, BacterialGlycolipidsMolecular StructureMutationMycobacterium marinumPhenolsProtein Structure, TertiarySpecies SpecificityAcyl Carrier ProteinBacterial ProteinsGlycolipidsPhenols

Identifiers

PMID25561717
PMCPMC4336343
OpenAlexW2025799059

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.