Evidence map›Paper›PMID 25561502›Full record

ArticleMolecular & cellular proteomics : MCP2015

Global analysis of myocardial peptides containing cysteines with irreversible sulfinic and sulfonic acid post-translational modifications.

Jana Paulech, Kiersten A Liddy, Kasper Engholm-Keller, Melanie Y White, Stuart J Cordwell

Abstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
  2. Review
  3. Proteomics of the heart.Physiological reviews · 2024
    Review
  4. Article
  5. ProtView: A Versatile Tool forJournal of proteome research · 2023
    Article
  6. Article
  7. Review
  8. Review
  9. Observational
  10. Article
  11. Review
  12. Review
  13. Review
  14. Review
  15. Biochemistry of proinflammatory macrophage activation.Cellular and molecular life sciences : CMLS · 2018
    Review
  16. ROLE OF THIOLS IN OXIDATIVE STRESS.Current opinion in toxicology · 2018
    Article
  17. Review
  18. Review
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jana PaulechFrom the ‡School of Molecular Bioscience, The University of Sydney, Australia 2006;
Kiersten A LiddyFrom the ‡School of Molecular Bioscience, The University of Sydney, Australia 2006; §Charles Perkins Centre, The University of Sydney, Australia 2006;
Kasper Engholm-Keller¶Children's Medical Research Institute, Westmead, Australia 2145; ‖Centre for Clinical Proteomics, Odense University Hospital, Odense C, Denmark DK-5000; **Department of Biochemistry and Molecular Biology, University of Southern Denmark, Denmark DK-5230;
Melanie Y WhiteFrom the ‡School of Molecular Bioscience, The University of Sydney, Australia 2006; §Charles Perkins Centre, The University of Sydney, Australia 2006; ‡‡Discipline of Pathology, School of Medical Sciences, The University of Sydney, Australia 2006.
Stuart J CordwellFrom the ‡School of Molecular Bioscience, The University of Sydney, Australia 2006; §Charles Perkins Centre, The University of Sydney, Australia 2006; ‡‡Discipline of Pathology, School of Medical Sciences, The University of Sydney, Australia 2006 stuart.cordwell@sydney.edu.au.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cysteine (Cys) oxidation is a crucial post-translational modification (PTM) associated with redox signaling and oxidative stress. As Cys is highly reactive to oxidants it forms a range of post-translational modifications, some that are biologically reversible (e.g. disulfides, Cys sulfenic acid) and others (Cys sulfinic [Cys-SO2H] and sulfonic [Cys-SO3H] acids) that are considered "irreversible." We developed an enrichment method to isolate Cys-SO2H/SO3H-containing peptides from complex tissue lysates that is compatible with tandem mass spectrometry (MS/MS). The acidity of these post-translational modification (pKa Cys-SO3H < 0) creates a unique charge distribution when localized on tryptic peptides at acidic pH that can be utilized for their purification. The method is based on electrostatic repulsion of Cys-SO2H/SO3H-containing peptides from cationic resins (i.e. "negative" selection) followed by "positive" selection using hydrophilic interaction liquid chromatography. Modification of strong cation exchange protocols decreased the complexity of initial flowthrough fractions by allowing for hydrophobic retention of neutral peptides. Coupling of strong cation exchange and hydrophilic interaction liquid chromatography allowed for increased enrichment of Cys-SO2H/SO3H (up to 80%) from other modified peptides. We identified 181 Cys-SO2H/SO3H sites from rat myocardial tissue subjected to physiologically relevant concentrations of H2O2 (<100 μm) or to ischemia/reperfusion (I/R) injury via Langendorff perfusion. I/R significantly increased Cys-SO2H/SO3H-modified peptides from proteins involved in energy utilization and contractility, as well as those involved in oxidative damage and repair.

Indexed as

Protein Processing, Post-TranslationalAnimalsCysteineMyocardiumPeptidesProteomeRatsRats, Inbred LewReperfusion InjuryStatic ElectricitySulfinic AcidsSulfonic AcidsTandem Mass SpectrometryCysteinePeptidesProteomeSulfinic AcidsSulfonic Acids

Identifiers

PMID25561502
PMCPMC4349981

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.