Evidence map›Paper›PMID 25561023›Full record

ArticleACS chemical neuroscience2015

Molecular determinants of α-synuclein mutants' oligomerization and membrane interactions.

Igor F Tsigelny, Yuriy Sharikov, Valentina L Kouznetsova, Jerry P Greenberg, Wolf Wrasidlo, Cassia Overk, Tania Gonzalez, Margarita Trejo, Brian Spencer, Kori Kosberg and 1 more

Abstract read
In one paragraph

Article in ACS chemical neuroscience, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
  2. Article
  3. Parkinson disease is a fatty acidopathy.Nature reviews. Neurology · 2025
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Neurons and Glia Interplay in α-Synucleinopathies.International journal of molecular sciences · 2021
    Review
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Igor F Tsigelny†San Diego Supercomputer Center, ‡Moores Cancer Center, §Department of Neurosciences, and ∥Department of Pathology, University of California San Diego, La Jolla, California 92093, United States.
Yuriy Sharikov†San Diego Supercomputer Center, ‡Moores Cancer Center, §Department of Neurosciences, and ∥Department of Pathology, University of California San Diego, La Jolla, California 92093, United States.
Valentina L Kouznetsova†San Diego Supercomputer Center, ‡Moores Cancer Center, §Department of Neurosciences, and ∥Department of Pathology, University of California San Diego, La Jolla, California 92093, United States.
Jerry P Greenberg†San Diego Supercomputer Center, ‡Moores Cancer Center, §Department of Neurosciences, and ∥Department of Pathology, University of California San Diego, La Jolla, California 92093, United States.
Wolf Wrasidlo†San Diego Supercomputer Center, ‡Moores Cancer Center, §Department of Neurosciences, and ∥Department of Pathology, University of California San Diego, La Jolla, California 92093, United States.
Cassia Overk†San Diego Supercomputer Center, ‡Moores Cancer Center, §Department of Neurosciences, and ∥Department of Pathology, University of California San Diego, La Jolla, California 92093, United States.
Tania Gonzalez†San Diego Supercomputer Center, ‡Moores Cancer Center, §Department of Neurosciences, and ∥Department of Pathology, University of California San Diego, La Jolla, California 92093, United States.
Margarita Trejo†San Diego Supercomputer Center, ‡Moores Cancer Center, §Department of Neurosciences, and ∥Department of Pathology, University of California San Diego, La Jolla, California 92093, United States.
Brian Spencer†San Diego Supercomputer Center, ‡Moores Cancer Center, §Department of Neurosciences, and ∥Department of Pathology, University of California San Diego, La Jolla, California 92093, United States.
Kori Kosberg†San Diego Supercomputer Center, ‡Moores Cancer Center, §Department of Neurosciences, and ∥Department of Pathology, University of California San Diego, La Jolla, California 92093, United States.
Eliezer Masliah†San Diego Supercomputer Center, ‡Moores Cancer Center, §Department of Neurosciences, and ∥Department of Pathology, University of California San Diego, La Jolla, California 92093, United States.

Funding

B-Synuclein as a Treatment for Lewy Body DiseaseR01AG018440 · NIA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI RISSMAN, ROBERT · 2001 to 2021
$5.2M
NIA NIH HHS AG188440NIA NIH HHS R01 AG018440
6 · The paper itself

Abstract

Parkinson's disease (PD) is associated with the formation of toxic α-synuclein oligomers that can penetrate the cell membrane. Familial forms of PD are caused by the point mutations A53T, A30P, E46K, and H50Q. Artificial point mutations E35K and E57K also increase oligomerization and pore formation. We generated structural conformations of α-synuclein and the above-mentioned mutants using molecular dynamics. We elucidated four main regions in these conformers contacting the membrane and found that the region including residues 39-45 (Zone2) may have maximum membrane penetration. E57K mutant had the highest rate of interaction with the membrane, followed by A53T, E46K, and E35K mutants and wild type (wt) α-synuclein. The mutant A30P had the smallest percentage of conformers that contact the membrane by Zone 2 than all other mutants and wt α-synuclein. These results were confirmed experimentally in vitro. We identified the key amino acids that can interact with the membrane (Y38, E62, and N65 (first hydrophilic layer); E104, E105, and D115 (second hydrophilic layer), and V15 and V26 (central hydrophobic layer)) and the residues that are involved in the interprotein contacts (L38, V48, V49, Q62, and T64). Understanding the molecular interactions of α-synuclein mutants is important for the design of compounds blocking the formation of toxic oligomers.

Indexed as

alpha-SynucleinAnimalsCell Line, TumorCell MembraneComputer SimulationHumansMagnetic Resonance ImagingModels, MolecularNeuroblastomaNonlinear DynamicsPoint MutationProtein ConformationProtein Structure, TertiaryRatsTransfectionalpha-Synucleinmembrane interactionsmolecular dynamicsneurodegenerationoligomersα-Synucleinα-synuclein mutants

Identifiers

PMID25561023
PMCPMC4944825

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.