Evidence map›Paper›PMID 25557671›Full record

ArticleAsian-Australasian journal of animal sciences2015

Genetic diversity and population structure in native chicken populations from myanmar, Thailand and laos by using 102 indels markers.

A A Maw, K Kawabe, T Shimogiri, W Rerkamnuaychoke, Y Kawamoto, S Masuda, S Okamoto

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Article in Asian-Australasian journal of animal sciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

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5citing papers in PubMed
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1 · What the graph read from it

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Who cites it

5 citing papers in PubMed.

  1. Article
  2. Association ofAnimals : an open access journal from MDPI · 2024
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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

A A MawUniversity of Veterinary Science, Yezin, Nay Pyi Taw 05282, Myanmar ; Faculty of Agriculture, Kagoshima University, Kagoshima 890-0065, Japan .
K KawabeNatural Science Centre for Research and Education, Kagoshima University, Kagoshima 890-0065, Japan .
T ShimogiriFaculty of Agriculture, Kagoshima University, Kagoshima 890-0065, Japan .
W RerkamnuaychokeFaculty of Veterinary Medicine, Kasetsart University, Bangkok 10900, Thailand .
Y KawamotoFaculty of Agriculture, University of Ryukyus, Nishihara 903-0213, Japan .
S MasudaLiberal Arts Education Centre, Aso Campus, Tokai University, Minami Aso-mura 869-1404, Japan .
S OkamotoFaculty of Agriculture, Kagoshima University, Kagoshima 890-0065, Japan .

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genetic diversity of native chicken populations from Myanmar, Thailand, and Laos was examined by using 102 insertion and/or deletion (indels) markers. Most of the indels loci were polymorphic (71% to 96%), and the genetic variability was similar in all populations. The average observed heterozygosities (H O ) and expected heterozygosities (H E ) ranged from 0.205 to 0.263 and 0.239 to 0.381, respectively. The coefficients of genetic differentiation (Gst) for all cumulated populations was 0.125, and the Thai native chickens showed higher Gst (0.088) than Myanmar (0.041) and Laotian (0.024) populations. The pairwise Fst distances ranged from 0.144 to 0.308 among populations. A neighbor-joining (NJ) tree, using Nei's genetic distance, revealed that Thai and Laotian native chicken populations were genetically close, while Myanmar native chickens were distant from the others. The native chickens from these three countries were thought to be descended from three different origins (K = 3) from STRUCTURE analysis. Genetic admixture was observed in Thai and Laotian native chickens, while admixture was absent in Myanmar native chickens.

Indexed as

Genetic AdmixtureGenetic DiversityIndels MarkersNative Chicken

Identifiers

PMID25557671
PMCPMC4283183

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