Evidence map›Paper›PMID 25557621›Full record

ArticleDevelopmental biology2015

Sox4 regulates choroid fissure closure by limiting Hedgehog signaling during ocular morphogenesis.

Wen Wen, Lakshmi Pillai-Kastoori, Stephen G Wilson, Ann C Morris

Open access · greenAbstract read
In one paragraph

Article in Developmental biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 50 citations in OpenAlex.

  1. Three Novel de NovoGenes · 2026
    Review
  2. Article
  3. Article
  4. Article
  5. Zebrafish model of RERE syndrome recapitulates key ophthalmic defects that are rescued by small molecule inhibitor of shh signaling.Developmental dynamics : an official publication of the American Association of Anatomists · 2023
    Article
  6. Review
  7. Comparative Analysis of miRNA-mRNA Regulation in the Testes ofInternational journal of molecular sciences · 2023
    Article
  8. Article
  9. Article
  10. Eyes on CHARGE syndrome: Roles of CHD7 in ocular development.Frontiers in cell and developmental biology · 2022
    Review
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. The Ocular Neural Crest: Specification, Migration, and Then What?Frontiers in cell and developmental biology · 2020
    Review
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Wen WenDepartment of Biology, University of Kentucky, Lexington, KY 40506-0225, USA.
Lakshmi Pillai-KastooriDepartment of Biology, University of Kentucky, Lexington, KY 40506-0225, USA.
Stephen G WilsonDepartment of Biology, University of Kentucky, Lexington, KY 40506-0225, USA.
Ann C MorrisDepartment of Biology, University of Kentucky, Lexington, KY 40506-0225, USA. Electronic address: ann.morris@uky.edu.
University of Kentucky · US

Funding

Vertebrate photoreceptor development and regenerationR01EY021769 · NEI · UNIVERSITY OF KENTUCKY · PI MORRIS, ANN C · 2012 to 2022
$3.2M
NEI NIH HHS R01 EY021769NEI NIH HHS R01EY021769
6 · The paper itself

Abstract

SoxC transcription factors play critical roles in many developmental processes, including neurogenesis, cardiac formation, and skeletal differentiation. In vitro and in vivo loss-of-function studies have suggested that SoxC genes are required for oculogenesis; however the mechanism was poorly understood. Here, we have explored the function of the SoxC factor Sox4 during zebrafish eye development. We show that sox4a and sox4b are expressed in the forebrain and periocular mesenchyme adjacent to the optic stalk during early eye development. Knockdown of sox4 in zebrafish resulted in coloboma, a structural malformation of the eye that is a significant cause of pediatric visual impairment in humans, in which the choroid fissure fails to close. Sox4 morphants displayed altered proximo-distal patterning of the optic vesicle, including expanded pax2 expression in the optic stalk, as well as ectopic cell proliferation in the retina. We show that the abnormal ocular morphogenesis observed in Sox4-deficient zebrafish is caused by elevated Hedgehog (Hh) signaling, and this is due to increased expression of the Hh pathway ligand Indian Hedgehog b (ihhb). Consistent with these results, coloboma in sox4 morphants could be rescued by pharmacological treatment with the Hh inhibitor cyclopamine, or by co-knockdown of ihhb. Conversely, overexpression of sox4 reduced Hh signaling and ihhb expression, resulting in cyclopia. Finally, we demonstrate that sox4 and sox11 have overlapping, but not completely redundant, functions in regulating ocular morphogenesis. Taken together, our data demonstrate that Sox4 is required to limit the extent of Hh signaling during eye development, and suggest that mutations in SoxC factors could contribute to the development of coloboma.

Indexed as

AnimalsAnimals, Genetically ModifiedBlotting, WesternChoroidEmbryo, NonmammalianEyeGene Expression Regulation, DevelopmentalGene Knockdown TechniquesGreen Fluorescent ProteinsHedgehog ProteinsIn Situ HybridizationIn Situ Hybridization, FluorescenceMicroscopy, FluorescenceMorphogenesisReverse Transcriptase Polymerase Chain ReactionSignal TransductionGreen Fluorescent ProteinsHedgehog ProteinsIhha protein, zebrafishihhb protein, zebrafishSOXC Transcription FactorsZebrafish ProteinsChoroid fissureColobomaEyeHedgehog signalingIndian HedgehogSox4Zebrafish

Identifiers

PMID25557621
PMCPMC4339509
OpenAlexW2052902096

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.