Evidence map›Paper›PMID 25556944›Full record

ArticleChemistry & biology2015

Probes to monitor activity of the paracaspase MALT1.

Janna Hachmann, Laura E Edgington-Mitchell, Marcin Poreba, Laura E Sanman, Marcin Drag, Matthew Bogyo, Guy S Salvesen

Open access · greenAbstract read
In one paragraph

Article in Chemistry & biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Peptide-based covalent inhibitors of MALT1 paracaspase.Bioorganic & medicinal chemistry letters · 2019
    Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Review
  11. The Paracaspase MALT1.Biochimie · 2016
    Review
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Janna HachmannSanford-Burnham Medical Research Institute, La Jolla, CA 92037, USA; Graduate School of Biomedical Sciences, Sanford-Burnham Medical Research Institute, La Jolla, CA 92037, USA.
Laura E Edgington-MitchellCancer Biology Program, Stanford School of Medicine, Stanford, CA 94305, USA; Department of Pathology, Stanford School of Medicine, Stanford, CA 94305, USA.
Marcin PorebaDivision of Bioorganic Chemistry, Wroclaw University of Technology, 50-370 Wroclaw, Poland.
Laura E SanmanDepartment of Pathology, Stanford School of Medicine, Stanford, CA 94305, USA; Department of Chemical and Systems Biology, Stanford School of Medicine, Stanford, CA 94305, USA.
Marcin DragDivision of Bioorganic Chemistry, Wroclaw University of Technology, 50-370 Wroclaw, Poland.
Matthew BogyoDepartment of Pathology, Stanford School of Medicine, Stanford, CA 94305, USA; Department of Microbiology and Immunology, Stanford School of Medicine, Stanford, CA 94305, USA.
Guy S SalvesenSanford-Burnham Medical Research Institute, La Jolla, CA 92037, USA. Electronic address: gsalvesen@sanfordburnham.org.
Stanford Medicine · USSanford Burnham Prebys Medical Discovery Institute · USWrocław University of Science and Technology · PL

Funding

Tumor Microenvironment and Cancer ImmunologyP30CA030199 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI Michael Jackson · 1985 to 2026
$107.2M
Survival Mechanisms for Apoptotic CaspaseR01GM099040 · NIGMS · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI SALVESEN, GUY S. · 2012 to 2020
$3.8M
Small Molecule Imaging of Protease ActivityR01EB005011 · NIBIB · STANFORD UNIVERSITY · PI BOGYO, MATTHEW · 2005 to 2013
$3.0M
IAP Family Proteins and CancerR01CA163743 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI SALVESEN, GUY S. · 2012 to 2016
$2.0M
NCI NIH HHS P30 CA030199NCI NIH HHS R01 CA163743NHLBI NIH HHS R01 HL11630703NIBIB NIH HHS R01 EB005011NIGMS NIH HHS R01-GM09040NIGMS NIH HHS R01 GM099040
6 · The paper itself

Abstract

The human paracaspase mucosa-associated lymphoid tissue lymphoma translocation protein 1 (MALT1) plays a central role in nuclear factor-κB (NF-κB) signaling as both a protease and scaffolding protein. Knocking out MALT1 leads to impaired NF-κB signaling and failure to mount an effective immune response. However, it is unclear to which degree it is the scaffolding function versus the proteolytic activity of MALT1 that is essential. Previous work involving a MALT1 inhibitor with low selectivity suggests that the enzymatic function plays an important role in different cell lines. To help elucidate this proteolytic role of MALT1, we have designed activity-based probes that inhibit its proteolytic activity. The probes selectively label active enzyme and can be used to inhibit MALT1 and trace its activity profile, helping to create a better picture of the significance of the proteolytic function of MALT1.

Indexed as

CaspasesCell Line, TumorHEK293 CellsHumansKineticsMolecular ProbesMucosa-Associated Lymphoid Tissue Lymphoma Translocation 1 ProteinMutationNeoplasm ProteinsNF-kappa BProtein BindingProteolysisRecombinant ProteinsSignal TransductionTransfectionCaspasesMALT1 protein, humanMolecular ProbesMucosa-Associated Lymphoid Tissue Lymphoma Translocation 1 ProteinNeoplasm ProteinsNF-kappa BRecombinant Proteins

Identifiers

PMID25556944
PMCPMC4304901
OpenAlexW2045183185

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.