Evidence map›Paper›PMID 25555688›Full record

ArticleGenetica2015

Characterization of mariner-like transposons of the mauritiana Subfamily in seven tree aphid species.

Imen Kharrat, Maha Mezghani, Nathalie Casse, Françoise Denis, Aurore Caruso, Hanem Makni, Pierre Capy, Jacques-Deric Rouault, Benoît Chénais, Mohamed Makni

Abstract read
PubMed Publisher
In one paragraph

Article in Genetica, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.1field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Mobilome of theInternational journal of molecular sciences · 2022
    Article
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Imen KharratFaculté des Sciences de Tunis, Université de Tunis El Manar, UR11ES10 Génomique des insectes ravageurs, 2092, Manar II, Tunisia.
Maha Mezghani
Nathalie Casse
Françoise Denis
Aurore Caruso
Hanem Makni
Pierre Capy
Jacques-Deric Rouault
Benoît Chénais
Mohamed Makni
Le Mans Université · FRTunis University · TNUniversité Paris-Sud · FRBiologie des Organismes et Écosystèmes Aquatiques · FRTunis El Manar University · TN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mariner-like elements (MLEs) are Class II transposons present in all eukaryotic genomes in which MLEs have been searched for. This article reports the detection of MLEs in seven of the main fruit tree aphid species out of eight species studied. Deleted MLE sequences of 916-919 bp were characterized, using the terminal-inverted repeats (TIRs) of mariner elements belonging to the mauritiana Subfamily as primers. All the sequences detected were deleted copies of full-length elements that included the 3'- and 5'-TIRs but displayed internal deletions affecting Mos1 activity. Networks based on the mtDNA cytochrome oxidase subunit-I (CO-I) and MLE sequences were incongruent, suggesting that mutations in transposon sequences had accumulated before speciation of tree aphid species occurred, and that they have been maintained in this species via vertical transmissions. This is the first evidence of the widespread occurrence of MLEs in aphids.

Indexed as

DNA Transposable ElementsAmino Acid SequenceAnimalsAphidsBase SequenceCluster AnalysisEvolution, MolecularGenes, InsectGenome, InsectMolecular Sequence DataOpen Reading FramesPhylogenySequence AlignmentDNA Transposable Elements

Identifiers

PMID25555688
OpenAlexW2064048012

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.