Evidence map›Paper›PMID 25553515›Full record

ArticleVirology2015

Suppression of hepatitis B virus DNA accumulation in chronically infected cells using a bacterial CRISPR/Cas RNA-guided DNA endonuclease.

Edward M Kennedy, Leda C Bassit, Henrik Mueller, Anand V R Kornepati, Hal P Bogerd, Ting Nie, Payel Chatterjee, Hassan Javanbakht, Raymond F Schinazi, Bryan R Cullen

Open access · greenAbstract readEvaluation Study
In one paragraph

Article in Virology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 121 papers.

0numbers the graph read from it
0cells of the map it votes in
121citing papers in PubMed
16.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

121 citing papers in PubMed, 235 citations in OpenAlex.

  1. Article
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  8. Review
  9. CRISPR/Cas9-mediated genome editing technique to control fall armyworm (Physiology and molecular biology of plants : an international journal of functional plant biology · 2024
    Review
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  12. Review
  13. Review
  14. Article
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  19. Review
  20. Therapeutic Application of Genome Editing Technologies in Viral Diseases.International journal of molecular sciences · 2022
    Review

61 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Edward M KennedyDepartment of Molecular Genetics & Microbiology and Center for Virology, Duke University Medical Center, Durham, NC, United States.
Leda C BassitCenter for AIDS Research, Laboratory of Biochemical Pharmacology, Department of Pediatrics, Emory University School of Medicine, Atlanta, GA, United States.
Henrik MuellerInfectious Diseases, F. Hoffmann-LaRoche, Inc., Basel, Switzerland.
Anand V R KornepatiDepartment of Molecular Genetics & Microbiology and Center for Virology, Duke University Medical Center, Durham, NC, United States.
Hal P BogerdDepartment of Molecular Genetics & Microbiology and Center for Virology, Duke University Medical Center, Durham, NC, United States.
Ting NieCenter for AIDS Research, Laboratory of Biochemical Pharmacology, Department of Pediatrics, Emory University School of Medicine, Atlanta, GA, United States.
Payel ChatterjeeCenter for AIDS Research, Laboratory of Biochemical Pharmacology, Department of Pediatrics, Emory University School of Medicine, Atlanta, GA, United States.
Hassan JavanbakhtInfectious Diseases, F. Hoffmann-LaRoche, Inc., Basel, Switzerland.
Raymond F SchinaziCenter for AIDS Research, Laboratory of Biochemical Pharmacology, Department of Pediatrics, Emory University School of Medicine, Atlanta, GA, United States. Electronic address: raymond.schinazi@emory.edu.
Bryan R CullenDepartment of Molecular Genetics & Microbiology and Center for Virology, Duke University Medical Center, Durham, NC, United States. Electronic address: bryan.cullen@duke.edu.
Emory University · USDuke Medical Center · USRoche (Switzerland) · CHDuke University · US

Funding

Virology and Molecular Biomarkers CoreP30AI050409 · NIAID · EMORY UNIVERSITY · PI Carlos del Rio · 2002 to 2026
$74.0M
Approaches Towards Eradication of Hepatitis B VirusI01BX002548 · VA · VETERANS HEALTH ADMINISTRATION · PI SCHINAZI, RAYMOND FELIX · 2015 to 2016
–
BLRD VA I01 BX002548NIAID NIH HHS P30 AI050409NIAID NIH HHS P30-AI050409
6 · The paper itself

Abstract

Hepatitis B virus (HBV) remains a major human pathogen, with over 240 million individuals suffering from chronic HBV infections. These can persist for decades due to the lack of therapies that can effectively target the stable viral covalently closed circular (ccc) DNA molecules present in infected hepatocytes. Using lentiviral transduction of a bacterial Cas9 gene and single guide RNAs (sgRNAs) specific for HBV, we observed effective inhibition of HBV DNA production in in vitro models of both chronic and de novo HBV infection. Cas9/sgRNA combinations specific for HBV reduced total viral DNA levels by up to ~1000-fold and HBV cccDNA levels by up to ~10-fold and also mutationally inactivated the majority of the residual viral DNA. Together, these data provide proof of principle for the hypothesis that CRISPR/Cas systems have the potential to serve as effective tools for the depletion of the cccDNA pool in chronically HBV infected individuals.

Indexed as

CRISPR-Cas SystemsBacterial ProteinsClustered Regularly Interspaced Short Palindromic RepeatsCRISPR-Associated ProteinsDeoxyribonuclease IDNA, ViralDown-RegulationGene TargetingHepatitis BHepatitis B virusHumansStreptococcus pyogenesVirus ReplicationBacterial ProteinsCRISPR-Associated ProteinsDeoxyribonuclease IDNA, ViralAntiviralcccDNACRISPR/CasDNA editingHBVLentiviral vector

Identifiers

PMID25553515
PMCPMC4323668
OpenAlexW2023422990

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.