Evidence map›Paper›PMID 25552603›Full record

ArticleG3 (Bethesda, Md.)2014

Population genetics of Anopheles coluzzii immune pathways and genes.

Susan M Rottschaefer, Jacob E Crawford, Michelle M Riehle, Wamdaogo M Guelbeogo, Awa Gneme, N'Fale Sagnon, Kenneth D Vernick, Brian P Lazzaro

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 3 countries.

Susan M RottschaeferDepartment of Entomology, Cornell University, Ithaca, New York 14853 smr53@cornell.edu.
Jacob E CrawfordDepartment of Integrative Biology, University of California, Berkeley, Berkeley, California 94720.
Michelle M RiehleDepartment of Microbiology, University of Minnesota, St. Paul, Minnesota 55108.
Wamdaogo M GuelbeogoCentre National de Recherche et de Formation sur le Paludisme, 01 BP 2208 Ouagadougou, Burkina Faso.
Awa GnemeCentre National de Recherche et de Formation sur le Paludisme, 01 BP 2208 Ouagadougou, Burkina Faso.
N'Fale SagnonCentre National de Recherche et de Formation sur le Paludisme, 01 BP 2208 Ouagadougou, Burkina Faso.
Kenneth D VernickDepartment of Microbiology, University of Minnesota, St. Paul, Minnesota 55108 Institut Pasteur, Unit of Insect Vector Genetics and Genomics, Department of Parasites and Insect Vectors, CNRS Unit of Hosts, Vectors and Pathogens (URA3012), Paris 75015, France.
Brian P LazzaroDepartment of Entomology, Cornell University, Ithaca, New York 14853.
Centre National de Recherche et de Formation sur le Paludisme · BFCornell University · USInstitut Pasteur · FRUniversity of California, Berkeley · USUniversity of Minnesota · US

Funding

Genomics of Mosquito Resistance to PlasmodiumR01AI042361 · NIAID · UNIVERSITY OF MINNESOTA TWIN CITIES · PI VERNICK, KENNETH D · 1998 to 2012
$4.8M
Evolutionary Genomics of Anti-Malaria Genes in MosquitoR01AI062995 · NIAID · CORNELL UNIVERSITY · PI LAZZARO, BRIAN · 2006 to 2010
$1.8M
NIAID NIH HHS R01 AI042361NIAID NIH HHS R01 AI062995
6 · The paper itself

Abstract

Natural selection is expected to drive adaptive evolution in genes involved in host-pathogen interactions. In this study, we use molecular population genetic analyses to understand how natural selection operates on the immune system of Anopheles coluzzii (formerly A. gambiae "M form"). We analyzed patterns of intraspecific and interspecific genetic variation in 20 immune-related genes and 17 nonimmune genes from a wild population of A. coluzzii and asked if patterns of genetic variation in the immune genes are consistent with pathogen-driven selection shaping the evolution of defense. We found evidence of a balanced polymorphism in CTLMA2, which encodes a C-type lectin involved in regulation of the melanization response. The two CTLMA2 haplotypes, which are distinguished by fixed amino acid differences near the predicted peptide cleavage site, are also segregating in the sister species A. gambiae ("S form") and A. arabiensis. Comparison of the two haplotypes between species indicates that they were not shared among the species through introgression, but rather that they arose before the species divergence and have been adaptively maintained as a balanced polymorphism in all three species. We additionally found that STAT-B, a retroduplicate of STAT-A, shows strong evidence of adaptive evolution that is consistent with neofunctionalization after duplication. In contrast to the striking patterns of adaptive evolution observed in these Anopheles-specific immune genes, we found no evidence of adaptive evolution in the Toll and Imd innate immune pathways that are orthologously conserved throughout insects. Genes encoding the Imd pathway exhibit high rates of amino acid divergence between Anopheles species but also display elevated amino acid diversity that is consistent with relaxed purifying selection. These results indicate that adaptive coevolution between A. coluzzii and its pathogens is more likely to involve novel or lineage-specific molecular mechanisms than the canonical humoral immune pathways.

Indexed as

Polymorphism, GeneticAnimalsAnophelesImmunity, InnateInsect ProteinsLectins, C-TypeSTAT Transcription FactorsToll-Like ReceptorsInsect ProteinsLectins, C-TypeSTAT Transcription FactorsToll-Like Receptorsbalancing selectionC-type lectingenetics of immunityinnate immunityJAK-STATpopulation genetics

Identifiers

PMID25552603
PMCPMC4349087
OpenAlexW2020346852

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.