Evidence map›Paper›PMID 25551675›Full record

ArticleAutophagy2014

Multiple functions of the SNARE protein Snap29 in autophagy, endocytic, and exocytic trafficking during epithelial formation in Drosophila.

Elena Morelli, Pierpaolo Ginefra, Valeria Mastrodonato, Galina V Beznoussenko, Tor Erik Rusten, David Bilder, Harald Stenmark, Alexandre A Mironov, Thomas Vaccari

Open access · bronzeAbstract read
In one paragraph

Article in Autophagy, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed, 2 pooled it
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 2 syntheses or guidelines pooled it, 86 citations in OpenAlex.

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  14. Autophagy initiation triggers p150Cellular and molecular life sciences : CMLS · 2024
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  15. Identification of secretory autophagy as a mechanism modulating activity-induced synaptic remodeling.Proceedings of the National Academy of Sciences of the United States of America · 2024
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  19. COVID-19 Biogenesis and Intracellular Transport.International journal of molecular sciences · 2023
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  20. Ciliogenesis membrane dynamics and organization.Seminars in cell & developmental biology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Elena Morellia IFOM - The FIRC Institute of Molecular Oncology ; Milan , Italy.
Pierpaolo Ginefra
Valeria Mastrodonato
Galina V Beznoussenko
Tor Erik Rusten
David Bilder
Harald Stenmark
Alexandre A Mironov
Thomas Vaccari
FIRC Institute of Molecular Oncology · ITOslo University Hospital · NOUniversity of California System · US

Funding

Mechanisms of Drosophila Tumor SuppressionR01GM090150 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI BILDER, DAVID · 2010 to 2018
$2.0M
NIGMS NIH HHS R01 GM090150Telethon GGP13225
6 · The paper itself

Abstract

How autophagic degradation is linked to endosomal trafficking routes is little known. Here we screened a collection of uncharacterized Drosophila mutants affecting membrane transport to identify new genes that also have a role in autophagy. We isolated a loss of function mutant in Snap29 (Synaptosomal-associated protein 29 kDa), the gene encoding the Drosophila homolog of the human protein SNAP29 and have characterized its function in vivo. Snap29 contains 2 soluble NSF attachment protein receptor (SNARE) domains and a asparagine-proline-phenylalanine (NPF motif) at its N terminus and rescue experiments indicate that both SNARE domains are required for function, whereas the NPF motif is in part dispensable. We find that Snap29 interacts with SNARE proteins, localizes to multiple trafficking organelles, and is required for protein trafficking and for proper Golgi apparatus morphology. Developing tissue lacking Snap29 displays distinctive epithelial architecture defects and accumulates large amounts of autophagosomes, highlighting a major role of Snap29 in autophagy and secretion. Mutants for autophagy genes do not display epithelial architecture or secretion defects, suggesting that the these alterations of the Snap29 mutant are unlikely to be caused by the impairment of autophagy. In contrast, we find evidence of elevated levels of hop-Stat92E (hopscotch-signal transducer and activator of transcription protein at 92E) ligand, receptor, and associated signaling, which might underlie the epithelial defects. In summary, our findings support a role of Snap29 at key steps of membrane trafficking, and predict that signaling defects may contribute to the pathogenesis of cerebral dysgenesis, neuropathy, ichthyosis, and palmoplantar keratoderma (CEDNIK), a human congenital syndrome due to loss of Snap29.

Indexed as

AnimalsAutophagyCell MovementDrosophila melanogasterDrosophila ProteinsEndosomesExosomesHumansPhagosomesProtein BindingProtein TransportQb-SNARE ProteinsQc-SNARE ProteinsSNARE ProteinsVesicular Transport ProteinsDrosophila ProteinsQb-SNARE ProteinsQc-SNARE ProteinsSnap29 protein, DrosophilaSNAP29 protein, humanSNARE ProteinsVesicular Transport ProteinsAtg, autophagy-relatedautophagyCEDNIK, cerebral dysgenesis, neuropathy, ichthyosis, and palmoplantar keratodermaCFP, cyan fluorescent proteindomedome, domelessEM, electron microscopyESCRT, endosomal sorting complex required for transportE(spl)mβ-HLH, enhancer of split mβ, helix-loop-helixFE, follicular epitheliumGFP, green fluorescent proteinhistone H3, His3hop-Stat92E, hopscotch-signal transducer and activator of transcription protein at 92EMENE, mutant eye no eclosionMVB, multivesicular bodyNECD, N extracellular domainN, NotchNotchNPF, asparagine-proline-phenylalanineos, outstretchedref(2)P, refractory to sigma PSnap29Snap29, synaptosomal-associated protein 29 kDaSNARESNARE, soluble NSF attachment protein receptorSocs36E, suppressor of cytokine signaling at 36ESyb, SynaptobrevinSyx, syntaxintraffickingusnpVamp, vesicle-associated membrane proteinV-ATPase, vacuolar H+-ATPaseVps25, vacuolar protein sorting 25WT, wild type

Identifiers

PMID25551675
PMCPMC4502674
OpenAlexW2061773040

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.