Evidence map›Paper›PMID 25551287›Full record

ArticleBMC plant biology2014

Co-localisation of the blackleg resistance genes Rlm2 and LepR3 on Brassica napus chromosome A10.

Nicholas J Larkan, Derek J Lydiate, Fengqun Yu, S Roger Rimmer, M Hossein Borhan

Abstract read
In one paragraph

Article in BMC plant biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Breeding and management of major resistance genes to stem canker/blackleg in Brassica crops.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Review
  3. Analysis of the role ofFrontiers in plant science · 2023
    Article
  4. Engineering Resistance againstPlants (Basel, Switzerland) · 2022
    Article
  5. Article
  6. Article
  7. Genetic Analysis of a Horizontal Resistance LocusFrontiers in plant science · 2021
    Article
  8. Review
  9. Recent Findings Unravel Genes and Genetic Factors UnderlyingInternational journal of molecular sciences · 2020
    Review
  10. Exploring Mechanisms of Quantitative Resistance toPlants (Basel, Switzerland) · 2020
    Article
  11. Review
  12. Article
  13. Review
  14. Transcriptional Insight IntoFrontiers in plant science · 2019
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Incorporating pleiotropic quantitative trait loci in dissection of complex traits: seed yield in rapeseed as an example.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Nicholas J Larkan
Derek J Lydiate
Fengqun Yu
S Roger Rimmer
M Hossein Borhan

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe protection of canola (Brassica napus) crops against blackleg disease, caused by the fungal pathogen Leptosphaeria maculans, is largely mediated by race-specific resistance genes (R-genes). While many R-genes effective against blackleg disease have been identified in Brassica species, information of the precise genomic locations of the genes is limited.

resultsIn this study, the Rlm2 gene for resistance to blackleg, located on chromosome A10 of the B. napus cultivar 'Glacier', was targeted for fine mapping. Molecular markers tightly linked to the gene were developed for use in mapping the resistance locus and defining the physical interval in B. napus. Rlm2 was localised to a 5.8 cM interval corresponding to approximately 873 kb of the B. napus chromosome A10.

conclusionThe recently-cloned B. napus R-gene, LepR3, occupies the same region of A10 as Rlm2 and analysis of the putative B. napus and B. rapa genes in the homologous region identified several additional candidate defense-related genes that may control Rlm2 function.

Indexed as

AscomycotaBrassica napusBreedingChromosome MappingChromosomes, PlantCrops, AgriculturalDisease ResistanceGenetic MarkersPlant DiseasesPlant ProteinsGenetic MarkersPlant Proteins

Identifiers

PMID25551287
PMCPMC4302512

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.