Evidence map›Paper›PMID 25551225›Full record

ArticlePloS one2014

Environmentally selected aphid variants in clonality context display differential patterns of methylation in the genome.

Claude Pasquier, Mathilde Clément, Aviv Dombrovsky, Stéphanie Penaud, Martine Da Rocha, Corinne Rancurel, Neil Ledger, Maria Capovilla, Alain Robichon

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Epigenetic Molecular Mechanisms in Insects.Neotropical entomology · 2020
    Review
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Claude PasquierInstitute of Developmental Biology and Cancer, CNRS, University Nice Sophia Antipolis, Sophia Antipolis, France.
Mathilde ClémentInstitute Sophia Agrobiotech, INRA/CNRS/UNS, University Nice Sophia Antipolis, Sophia Antipolis, France.
Aviv DombrovskyInstitute Sophia Agrobiotech, INRA/CNRS/UNS, University Nice Sophia Antipolis, Sophia Antipolis, France; Institute of Plant Protection, Volcani Center, Rehovot, Israel.
Stéphanie PenaudBeckman Coulter Genomics SA, Grenoble, France.
Martine Da RochaInstitute Sophia Agrobiotech, INRA/CNRS/UNS, University Nice Sophia Antipolis, Sophia Antipolis, France.
Corinne RancurelInstitute Sophia Agrobiotech, INRA/CNRS/UNS, University Nice Sophia Antipolis, Sophia Antipolis, France.
Neil LedgerInstitute Sophia Agrobiotech, INRA/CNRS/UNS, University Nice Sophia Antipolis, Sophia Antipolis, France.
Maria CapovillaInstitute Sophia Agrobiotech, INRA/CNRS/UNS, University Nice Sophia Antipolis, Sophia Antipolis, France.
Alain RobichonInstitute Sophia Agrobiotech, INRA/CNRS/UNS, University Nice Sophia Antipolis, Sophia Antipolis, France.
Institut Sophia Agrobiotech · FRCentre National de la Recherche Scientifique · FRQuantum Genomics (France) · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Heritability of acquired phenotypic traits is an adaptive evolutionary process that appears more complex than the basic allele selection guided by environmental pressure. In insects, the trans-generational transmission of epigenetic marks in clonal and/or sexual species is poorly documented. Aphids were used as a model to explore this feature because their asexual phase generates a stochastic and/or environment-oriented repertoire of variants. The a priori unchanged genome in clonal individuals prompts us to hypothesize whether covalent methyl DNA marks might be associated to the phenotypic variability and fitness selection. The full differential transcriptome between two environmentally selected clonal variants that originated from the same founder mother was mapped on the entire genomic scaffolds, in parallel with the methyl cytosine distribution. Data suggest that the assortments of heavily methylated DNA sites are distinct in these two clonal phenotypes. This might constitute an epigenetic mechanism that confers the robust adaptation of insect species to various environments involving clonal reproduction.

Indexed as

DNA MethylationEnvironmentEvolution, MolecularGenetic VariationSelection, GeneticAnimalsAphidsCpG IslandsEpigenesis, GeneticFemaleFounder EffectGene Expression ProfilingGene OntologyGenome, InsectMalePhenotype

Identifiers

PMID25551225
PMCPMC4281257
OpenAlexW1998070571

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.