Evidence map›Paper›PMID 25551188›Full record

ArticleMolecules (Basel, Switzerland)2014

Characterization of ambrette seed oil and its mode of action in bacteria.

Selvaraj Arokiyaraj, Seong Ho Choi, Yoonseok Lee, Rajaraman Bharanidharan, Villianur Ibrahim Hairul-Islam, Badathala Vijayakumar, Young Kyoon Oh, Vannam Dinesh-Kumar, Savariar Vincent, Kyoung Hoon Kim

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Essential Oil Composition ofMolecules (Basel, Switzerland) · 2019
    Article
  6. Silver nanopaticles synthesized using the seed extract ofSaudi journal of biological sciences · 2019
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 2 countries.

Selvaraj ArokiyarajInstitute of Green Bio Science & Technology, Seoul National University, Pyeongchang-daero 232916, Korea. arokiyaraj16@gmail.com.
Seong Ho ChoiDepartment of Animal Science, Chungbuk National University, Chunbuk 361763, Korea. seongho@cbnu.ac.kr.
Yoonseok LeeInstitute of Green Bio Science & Technology, Seoul National University, Pyeongchang-daero 232916, Korea. yoonseok95@snu.ac.kr.
Rajaraman BharanidharanDepartment of Biotechnology, Vel Tech High Tech Dr.Rangarajan Dr.Sakunthala Engineering College (Anna University), Chennai 600062, India. bharanitharshan76@gmail.com.
Villianur Ibrahim Hairul-IslamPondicherry Centre for Biological Sciences, Pondicherry 605005, India. pcbsresearch@gmail.com.
Badathala VijayakumarDepartment of Chemistry, Vel Tech High Tech Dr.Rangarajan Dr.Sakunthala Engineering College (Anna University), Chennai 600062, India. badathala@rediffmail.com.
Young Kyoon OhDepartment of Animal Nutrition and Physiology, National Institute of Animal Science, Rural Development Administration, Suwon 441706, Korea. oh665@korea.kr.
Vannam Dinesh-KumarCentre for Environment Research and Development, Loyola College, Chennai 600034, India. zoomin.dinesh@gmail.com.
Savariar VincentCentre for Environment Research and Development, Loyola College, Chennai 600034, India. svincentloyola@gmail.com.
Kyoung Hoon KimInstitute of Green Bio Science & Technology, Seoul National University, Pyeongchang-daero 232916, Korea. khhkim@snu.ac.kr.
Anna University, Chennai · INSeoul National University of Science and Technology · KRChungbuk National University · KRNational Institute of Animal Science · KRPondicherry University · INSeoul National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the present study, chemical composition and the antibacterial mechanism of ambrette seed oil are investigated. Chemical composition of the oil was analysed by gas chromatography-mass spectrometry (GC-MS). Thirty-five compounds were identified and the major compounds were found to be farnesol acetate (51.45%) and ambrettolide (12.96%). The antibacterial activity was performed by well diffusion assay and the mechanisms were studied by measuring the alkaline phosphatase (ALP), lactate dehydrogenase (LDH) and protein leakage assays. The antibacterial effect of the ambrette seed oil showed inhibitory effect against Bacillus subtilis, Staphylococcus aureus and Enterococcus faecalis. The LDH activity was high in all tested bacteria compared with control, whereas the ALP and protein concentrations were also increased in E. faecalis. Molecular docking revealed the ligands farnesol acetate and ambrettolide had satisfactory binding energy towards the beta lactamase TEM-72 and dihydrofolate reductase (DHFR) protein. Due to its better antibacterial properties, the ambrette seed oil could be used as a source of antibacterial agents.

Indexed as

Alkaline PhosphataseAnti-Bacterial AgentsBacillus subtilisEnterococcus faecalisGas Chromatography-Mass SpectrometryL-Lactate DehydrogenaseMicrobial Sensitivity TestsMolecular Docking SimulationPlant OilsSeedsStaphylococcus aureusAlkaline PhosphataseAnti-Bacterial AgentsL-Lactate DehydrogenasePlant Oils

Identifiers

PMID25551188
PMCPMC6272330
OpenAlexW2083560033

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.