Evidence map›Paper›PMID 25551029›Full record

ArticleBeilstein journal of nanotechnology2014

Data-adaptive image-denoising for detecting and quantifying nanoparticle entry in mucosal tissues through intravital 2-photon microscopy.

Torsten Bölke, Lisa Krapf, Regina Orzekowsky-Schroeder, Tobias Vossmeyer, Jelena Dimitrijevic, Horst Weller, Anna Schüth, Antje Klinger, Gereon Hüttmann, Andreas Gebert

Open access · diamondAbstract read
In one paragraph

Article in Beilstein journal of nanotechnology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 9 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Torsten BölkeUniversity Hospital Jena, Friedrich Schiller University Jena, Institute of Anatomy II, Teichgraben 7, 07740 Jena, Germany.
Lisa KrapfUniversity of Lübeck, Institute of Biomedical Optics, Peter-Monnik-Weg 4, 23562 Lübeck, Germany.
Regina Orzekowsky-SchroederOlympus Winter & Ibe GmbH, R&D Optical Design, Kuehnstrasse 61, 22045 Hamburg, Germany.
Tobias VossmeyerUniversity of Hamburg, Institute of Physical Chemistry, Grindelallee 117, 20146 Hamburg, Germany.
Jelena DimitrijevicUniversity of Hamburg, Institute of Physical Chemistry, Grindelallee 117, 20146 Hamburg, Germany.
Horst WellerUniversity of Hamburg, Institute of Physical Chemistry, Grindelallee 117, 20146 Hamburg, Germany.
Anna SchüthUniversity of Lübeck, Institute of Anatomy, Ratzeburger Allee 160, 23538 Lübeck, Germany.
Antje KlingerUniversity of Lübeck, Institute of Anatomy, Ratzeburger Allee 160, 23538 Lübeck, Germany.
Gereon HüttmannUniversity of Lübeck, Institute of Biomedical Optics, Peter-Monnik-Weg 4, 23562 Lübeck, Germany.
Andreas GebertUniversity Hospital Jena, Friedrich Schiller University Jena, Institute of Anatomy II, Teichgraben 7, 07740 Jena, Germany.
University of Lübeck · DEUniversität Hamburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Intravital 2-photon microscopy of mucosal membranes across which nanoparticles enter the organism typically generates noisy images. Because the noise results from the random statistics of only very few photons detected per pixel, it cannot be avoided by technical means. Fluorescent nanoparticles contained in the tissue may be represented by a few bright pixels which closely resemble the noise structure. We here present a data-adaptive method for digital denoising of datasets obtained by 2-photon microscopy. The algorithm exploits both local and non-local redundancy of the underlying ground-truth signal to reduce noise. Our approach automatically adapts the strength of noise suppression in a data-adaptive way by using a Bayesian network. The results show that the specific adaption to both signal and noise characteristics improves the preservation of fine structures such as nanoparticles while less artefacts were produced as compared to reference algorithms. Our method is applicable to other imaging modalities as well, provided the specific noise characteristics are known and taken into account.

Indexed as

2-photon microscopy (2PM)denoisingin vivo imagingnanoparticlesquantum dotssignal to noise ratio (SNR)

Identifiers

PMID25551029
PMCPMC4273251
OpenAlexW1992874821

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.