Evidence map›Paper›PMID 25550503›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

β-Helical architecture of cytoskeletal bactofilin filaments revealed by solid-state NMR.

Suresh Vasa, Lin Lin, Chaowei Shi, Birgit Habenstein, Dietmar Riedel, Juliane Kühn, Martin Thanbichler, Adam Lange

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Halofilins as emerging bactofilin families of archaeal cell shape plasticity orchestrators.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. Article
  9. Article
  10. VirB, a key transcriptional regulator ofbioRxiv : the preprint server for biology · 2023
    Article
  11. Article
  12. Article
  13. Distinct regions ofeLife · 2022
    Article
  14. Review
  15. Insights Into the Helical Shape Complex ofFrontiers in microbiology · 2022
    Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Suresh VasaDepartment of NMR-Based Structural Biology and.
Lin LinProkaryotic Cell Biology Group, Max Planck Institute for Terrestrial Microbiology, 35043 Marburg, Germany; Faculty of Biology and.
Chaowei ShiDepartment of NMR-Based Structural Biology and Department of Molecular Biophysics, Leibniz-Institut für Molekulare Pharmakologie, 13125 Berlin, Germany; and.
Birgit HabensteinDepartment of NMR-Based Structural Biology and.
Dietmar RiedelElectron Microscopy Group, Max Planck Institute for Biophysical Chemistry, 37077 Göttingen, Germany;
Juliane KühnProkaryotic Cell Biology Group, Max Planck Institute for Terrestrial Microbiology, 35043 Marburg, Germany; Faculty of Biology and.
Martin ThanbichlerProkaryotic Cell Biology Group, Max Planck Institute for Terrestrial Microbiology, 35043 Marburg, Germany; Faculty of Biology and LOEWE Center for Synthetic Microbiology, Philipps-Universität, 35043 Marburg, Germany; alange@fmp-berlin.de thanbichler@uni-marburg.de.
Adam LangeDepartment of NMR-Based Structural Biology and Department of Molecular Biophysics, Leibniz-Institut für Molekulare Pharmakologie, 13125 Berlin, Germany; and Institut für Biologie, Humboldt-Universität zu Berlin, 10115 Berlin, Germany alange@fmp-berlin.de thanbichler@uni-marburg.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bactofilins are a widespread class of bacterial filament-forming proteins, which serve as cytoskeletal scaffolds in various cellular pathways. They are characterized by a conserved architecture, featuring a central conserved domain (DUF583) that is flanked by variable terminal regions. Here, we present a detailed investigation of bactofilin filaments from Caulobacter crescentus by high-resolution solid-state NMR spectroscopy. De novo sequential resonance assignments were obtained for residues Ala39 to Phe137, spanning the conserved DUF583 domain. Analysis of the secondary chemical shifts shows that this core region adopts predominantly β-sheet secondary structure. Mutational studies of conserved hydrophobic residues located in the identified β-strand segments suggest that bactofilin folding and polymerization is mediated by an extensive and redundant network of hydrophobic interactions, consistent with the high intrinsic stability of bactofilin polymers. Transmission electron microscopy revealed a propensity of bactofilin to form filament bundles as well as sheet-like, 2D crystalline assemblies, which may represent the supramolecular arrangement of bactofilin in the native context. Based on the diffraction pattern of these 2D crystalline assemblies, scanning transmission electron microscopy measurements of the mass per length of BacA filaments, and the distribution of β-strand segments identified by solid-state NMR, we propose that the DUF583 domain adopts a β-helical architecture, in which 18 β-strand segments are arranged in six consecutive windings of a β-helix.

Indexed as

Amino Acid SequenceBacterial ProteinsCaulobacter crescentusConserved SequenceCytoskeletonElectron Microscope TomographyHydrophobic and Hydrophilic InteractionsMicroscopy, Electron, TransmissionModels, MolecularMolecular Sequence DataNuclear Magnetic Resonance, BiomolecularProtein MultimerizationProtein Structure, SecondaryStructural Homology, ProteinBacterial Proteinscytoskeletonfilamentsprotein structuresolid-state NMR

Identifiers

PMID25550503
PMCPMC4299214

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.