Evidence map›Paper›PMID 25549571›Full record

ArticleJournal of proteomics2015

Quantitative mass spectrometric immunoassay for the chemokine RANTES and its variants.

Olgica Trenchevska, Nisha D Sherma, Paul E Oran, Peter D Reaven, Randall W Nelson, Dobrin Nedelkov

Abstract read
In one paragraph

Article in Journal of proteomics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 21 citations in OpenAlex.

  1. Genetic polymorphisms as multi-biomarkers in severe acute respiratory syndrome (SARS) by coronavirus infection: A systematic review of candidate gene association studies.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2021
    Pooled it
  2. Review
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  6. Article
  7. Development of quantitative mass spectrometric immunoassay for serum amyloid A.Biomarkers : biochemical indicators of exposure, response, and susceptibility to chemicals · 2016
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Olgica TrenchevskaThe Biodesign Institute at Arizona State University, Tempe, AZ 85287, United States. Electronic address: olgica.trenchevska@asu.edu.
Nisha D ShermaThe Biodesign Institute at Arizona State University, Tempe, AZ 85287, United States.
Paul E OranThe Biodesign Institute at Arizona State University, Tempe, AZ 85287, United States.
Peter D ReavenPhoenix VA Health Care System, United States.
Randall W NelsonThe Biodesign Institute at Arizona State University, Tempe, AZ 85287, United States.
Dobrin NedelkovThe Biodesign Institute at Arizona State University, Tempe, AZ 85287, United States.
Arizona State University · USPhoenix VA Health Care System · US

Funding

Team Approach to Translate Novel Biomarkers for DiabetesR24DK090958 · NIDDK · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI NELSON, RANDALL W, PEARSON, JAMES DAVID · 2011 to 2014
$4.5M
Population-Based Proteomic Investigation of Type 2 Diabetes MellitusR01DK082542 · NIDDK · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI NELSON, RANDALL W · 2010 to 2014
$3.0M
NIDDK NIH HHS R01 DK082542NIDDK NIH HHS R01DK082542NIDDK NIH HHS R24 DK090958NIDDK NIH HHS R24DK090958
6 · The paper itself

Abstract

The chemokine RANTES plays a key role in inflammation, cell recruitment and T cell activation. RANTES is heterogenic and exists as multiple variants in vivo. Herein we describe the development and characterization of a fully quantitative mass spectrometric immunoassay (MSIA) for analysis of intact RANTES and its proteoforms in human serum and plasma samples. The assay exhibits linearity over a wide concentration range (1.56-200ng/mL), intra- and inter-assay precision with CVs <10%, and good linearity and recovery correlations. The assay was tested in different biological matrices, and it was benchmarked against an existing RANTES ELISA. The new RANTES MSIA was used to analyze RANTES and its proteoforms in a small clinical cohort, revealing the quantitative distribution and frequency of the native and truncated RANTES proteoforms. BIOLOGICAL SIGNIFICANCE: In the last two decades, RANTES has been studied extensively due to its association with numerous clinical conditions, including kidney-related, autoimmune, cardiovascular, viral and metabolic pathologies. Although a single gene product, RANTES is expressed in a range of cells and tissues presenting with different endogenously produced variants and PTMs. The structural variety and population diversity that has been identified for RANTES necessitate developing advanced methodologies that can provide insight into the protein heterogeneity and its function and regulation in disease. In this work we present a simple, efficient and high-throughput mass spectrometric immunoassay (MSIA) method for analysis of RANTES proteoforms. RANTES MSIA can detect and analyze RANTES proteoforms and provide an insight into the endogenous protein modifications.

Indexed as

Chemokine CCL5Enzyme-Linked Immunosorbent AssayHumansMass SpectrometryProtein IsoformsCCL5 protein, humanChemokine CCL5Protein IsoformsChemokineMass spectrometric immunoassayQuantitative analysisRANTES

Identifiers

PMID25549571
PMCPMC4356132
OpenAlexW2089780656

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.