Evidence map›Paper›PMID 25548907›Full record

ArticlePloS one2014

Expression of tumor necrosis factor-alpha-mediated genes predicts recurrence-free survival in lung cancer.

Baohua Wang, Ning Song, Tong Yu, Lianya Zhou, Helin Zhang, Lin Duan, Wenshu He, Yihua Zhu, Yunfei Bai, Miao Zhu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Baohua WangDepartment of Thoracic Surgery, The Second Hospital of HeBei Medical University, Shijiazhuang, 050000, China.
Ning SongDepartment of Respiratory Medicine, The Second Hospital of HeBei Medical University, Shijiazhuang, 050000, China.
Tong YuNanjing Decode Genomics Biotechnology Co., Ltd., Nanjing, 210019, China.
Lianya ZhouDepartment of Thoracic Surgery, The Second Hospital of HeBei Medical University, Shijiazhuang, 050000, China.
Helin ZhangDepartment of Thoracic Surgery, The Second Hospital of HeBei Medical University, Shijiazhuang, 050000, China.
Lin DuanDepartment of Respiratory Medicine, The Second Hospital of HeBei Medical University, Shijiazhuang, 050000, China.
Wenshu HeDepartment of Respiratory Medicine, The Second Hospital of HeBei Medical University, Shijiazhuang, 050000, China.
Yihua ZhuSchool of Biological Sciences and Medical Engineering, Southeast University, Nanjing, 210096, China; College of Information Science and Technology, Nanjing Agricultural University, Nanjing, 210095, China.
Yunfei BaiSchool of Biological Sciences and Medical Engineering, Southeast University, Nanjing, 210096, China.
Miao ZhuNanjing Decode Genomics Biotechnology Co., Ltd., Nanjing, 210019, China.
Hebei Medical University · CNSecond Hospital of Hebei Medical University · CNSoutheast University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, we conducted a meta-analysis on high-throughput gene expression data to identify TNF-α-mediated genes implicated in lung cancer. We first investigated the gene expression profiles of two independent TNF-α/TNFR KO murine models. The EGF receptor signaling pathway was the top pathway associated with genes mediated by TNF-α. After matching the TNF-α-mediated mouse genes to their human orthologs, we compared the expression patterns of the TNF-α-mediated genes in normal and tumor lung tissues obtained from humans. Based on the TNF-α-mediated genes that were dysregulated in lung tumors, we developed a prognostic gene signature that effectively predicted recurrence-free survival in lung cancer in two validation cohorts. Resampling tests suggested that the prognostic power of the gene signature was not by chance, and multivariate analysis suggested that this gene signature was independent of the traditional clinical factors and enhanced the identification of lung cancer patients at greater risk for recurrence.

Indexed as

BiomarkersHumansLung NeoplasmsMultivariate AnalysisNeoplasm Recurrence, LocalOligonucleotide Array Sequence AnalysisPrognosisRecurrenceRisk AssessmentTumor Necrosis Factor-alphaBiomarkersTumor Necrosis Factor-alpha

Identifiers

PMID25548907
PMCPMC4280165
OpenAlexW2026535711

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.