Evidence map›Paper›PMID 25548881›Full record

ArticleJournal of visualized experiments : JoVE2014

Vibratome sectioning mouse retina to prepare photoreceptor cultures.

Emmanuelle Clérin, Ying Yang, Valérie Forster, Valérie Fontaine, José-Alain Sahel, Thierry Léveillard

Abstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Emmanuelle ClérinDepartment of Genetics, UMR_S 968, Institut de la Vision; Sorbonne Universités, Paris 06, UMR_S 968, Institut de la Vision; INSERM, U968, Institut de la Vision; CNRS, UMR_7210, Institut de la Vision.
Ying YangDepartment of Genetics, UMR_S 968, Institut de la Vision; Sorbonne Universités, Paris 06, UMR_S 968, Institut de la Vision; INSERM, U968, Institut de la Vision; CNRS, UMR_7210, Institut de la Vision.
Valérie ForsterDepartment of Visual Information, UMR_S 968, Institut de la Vision; Sorbonne Universités, Paris 06, UMR_S 968, Institut de la Vision; INSERM, U968, Institut de la Vision; CNRS, UMR_7210, Institut de la Vision.
Valérie FontaineExploratory Team, UMR_S 968, Institut de la Vision; Sorbonne Universités, Paris 06, UMR_S 968, Institut de la Vision; INSERM, U968, Institut de la Vision; CNRS, UMR_7210, Institut de la Vision.
José-Alain SahelSorbonne Universités, Paris 06, UMR_S 968, Institut de la Vision; INSERM, U968, Institut de la Vision; CNRS, UMR_7210, Institut de la Vision.
Thierry LéveillardDepartment of Genetics, UMR_S 968, Institut de la Vision; Sorbonne Universités, Paris 06, UMR_S 968, Institut de la Vision; INSERM, U968, Institut de la Vision; CNRS, UMR_7210, Institut de la Vision; thierry.leveillard@inserm.fr.
Institut de la Vision · FRSorbonne Université · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The retina is a part of the central nervous system that has organized architecture, with neurons in layers from the photoreceptors, both rods and cones in contact with the retinal pigmented epithelium in the most distant part on the retina considering the direction of light, and the ganglion cells in the most proximal distance. This architecture allows the isolation of the photoreceptor layer by vibratome sectioning. The dissected neural retina of a mouse aged 8 days is flat-embedded in 4% gelatin on top of a slice of 20% gelatin photoreceptor layer facing down. Using a vibratome and a double edged razor blade, the 100 µm thick inner retina is sectioned. This section contains the ganglion cells and the inner layer with notably the bipolar cells. An intermediary section of 15 µm is discarded before 200 µm of the outer retina containing the photoreceptors is recovered. The gelatin is removed by heating at 37 °C. Pieces of outer layer are incubated in 500 µl of Ringer's solution with 2 units of activated papain for 20 min at 37 °C. The reaction is stopped by adding 500 µl 10% fetal calf serum (FCS) in Dulbecco's Modified Eagle Medium (DMEM), then 25 units of DNAse I is added before centrifugation at RT, washed several times to remove serum and the cells are resuspended in 500 µl of DMEM and seeded at 1 x 10(5) cells/cm(2). The cells are grown to 5 days in vitro and their viability scored using live/dead assay. The purity of the culture is first determined by microscopic observation during the experiment. The purity is then validated by seeding and fixing cells on a histological slide and analyzing using a rabbit polyclonal anti-SAG, a photoreceptor marker and mouse monoclonal anti-RHO, a rod photoreceptor specific marker. Alternatively, the photoreceptor layer (97% rods) can be used for gene or protein expression analysis and for transplantation.

Indexed as

AnimalsCells, CulturedCell SeparationMiceMicrotomyRetinal Cone Photoreceptor CellsRetinal Rod Photoreceptor Cells

Identifiers

PMID25548881
PMCPMC4354458
OpenAlexW2072896043

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.