Evidence map›Paper›PMID 25548164›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Human mutations in methylenetetrahydrofolate dehydrogenase 1 impair nuclear de novo thymidylate biosynthesis.

Martha S Field, Elena Kamynina, David Watkins, David S Rosenblatt, Patrick J Stover

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 64 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Regulatory mechanisms of one-carbon metabolism enzymes.The Journal of biological chemistry · 2023
    Review
  9. Article
  10. Review
  11. Article
  12. Orthogonal genome-wide screens of bat cells identify MTHFD1 as a target of broad antiviral therapy.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  13. Article
  14. Article
  15. Deoxyuracil in DNA in health and disease.Current opinion in clinical nutrition and metabolic care · 2020
    Review
  16. Review
  17. Article
  18. Review
  19. Cell cycle regulation of folate-mediated one-carbon metabolism.Wiley interdisciplinary reviews. Systems biology and medicine · 2018
    Review
  20. Nuclear Folate Metabolism.Annual review of nutrition · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Martha S FieldDivision of Nutritional Sciences and.
Elena KamyninaDivision of Nutritional Sciences and.
David WatkinsDepartment of Human Genetics, McGill University, Montreal, Quebec, Canada H3A 1B1; and Department of Medical Genetics, McGill University Health Centre, Montreal, Quebec, Canada H3G 1A4.
David S RosenblattDepartment of Human Genetics, McGill University, Montreal, Quebec, Canada H3A 1B1; and Department of Medical Genetics, McGill University Health Centre, Montreal, Quebec, Canada H3G 1A4.
Patrick J StoverDivision of Nutritional Sciences and Graduate Field of Biochemistry, Molecular and Cell Biology, Cornell University, Ithaca, NY 14853; PJS13@cornell.edu.
McGill University · CANutrition Sciences (Belgium) · BECornell University · US

Funding

Homeostatic Regulation of Folate MetabolismR37DK058144 · NIDDK · TEXAS A&M AGRILIFE RESEARCH · PI STOVER, PATRICK J · 2012 to 2021
$3.7M
GENE-NUTRIENT INTERACTIONS IN NEURAL TUBE DEFECTSR01HD059120 · NICHD · CORNELL UNIVERSITY · PI STOVER, PATRICK J · 2008 to 2018
$3.4M
NICHD NIH HHS R01 HD059120NIDDK NIH HHS R37 DK058144NIDDK NIH HHS R37DK58144
6 · The paper itself

Abstract

An inborn error of metabolism associated with mutations in the human methylenetetrahydrofolate dehydrogenase 1 (MTHFD1) gene has been identified. The proband presented with SCID, megaloblastic anemia, and neurologic abnormalities, but the causal metabolic impairment is unknown. SCID has been associated with impaired purine nucleotide metabolism, whereas megaloblastic anemia has been associated with impaired de novo thymidylate (dTMP) biosynthesis. MTHFD1 functions to condense formate with tetrahydrofolate and serves as the primary entry point of single carbons into folate-dependent one-carbon metabolism in the cytosol. In this study, we examined the impact of MTHFD1 loss of function on folate-dependent purine, dTMP, and methionine biosynthesis in fibroblasts from the proband with MTHFD1 deficiency. The flux of formate incorporation into methionine and dTMP was decreased by 90% and 50%, respectively, whereas formate flux through de novo purine biosynthesis was unaffected. Patient fibroblasts exhibited enriched MTHFD1 in the nucleus, elevated uracil in DNA, lower rates of de novo dTMP synthesis, and increased salvage pathway dTMP biosynthesis relative to control fibroblasts. These results provide evidence that impaired nuclear de novo dTMP biosynthesis can lead to both megaloblastic anemia and SCID in MTHFD1 deficiency.

Indexed as

Amino Acid SubstitutionAnemia, MegaloblasticCell LineCell NucleusCodon, NonsenseDNA DamageFibroblastsHumansMetabolic Networks and PathwaysMethylenetetrahydrofolate Dehydrogenase (NADP)Minor Histocompatibility AntigensMutant ProteinsPhenotypePoint MutationSevere Combined ImmunodeficiencyThymidine MonophosphateCodon, NonsenseMethylenetetrahydrofolate Dehydrogenase (NADP)Minor Histocompatibility AntigensMTHFD1 protein, humanMutant ProteinsThymidine Monophosphatefolatemegaloblastic anemiaMTHFD1SCIDthymidylate

Identifiers

PMID25548164
PMCPMC4299200
OpenAlexW1977359945

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.