Evidence map›Paper›PMID 25548163›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Cryptic carbon and sulfur cycling between surface ocean plankton.

Bryndan P Durham, Shalabh Sharma, Haiwei Luo, Christa B Smith, Shady A Amin, Sara J Bender, Stephen P Dearth, Benjamin A S Van Mooy, Shawn R Campagna, Elizabeth B Kujawinski and 2 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 172 papers.

0numbers the graph read from it
0cells of the map it votes in
172citing papers in PubMed
21.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

172 citing papers in PubMed, 414 citations in OpenAlex.

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  20. Iron limitation triggers roseoceramide biosynthesis and membrane remodeling in marine roseobacter.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article

112 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Bryndan P DurhamDepartment of Microbiology, University of Georgia, Athens, GA 30602;
Shalabh SharmaDepartment of Marine Sciences, University of Georgia, Athens, GA 30602;
Haiwei LuoDepartment of Marine Sciences, University of Georgia, Athens, GA 30602;
Christa B SmithDepartment of Marine Sciences, University of Georgia, Athens, GA 30602;
Shady A AminSchool of Oceanography, University of Washington, Seattle, WA 98195;
Sara J BenderDepartment of Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution, Woods Hole, MA 02543; and.
Stephen P DearthDepartment of Chemistry, University of Tennessee, Knoxville, TN 37996.
Benjamin A S Van MooyDepartment of Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution, Woods Hole, MA 02543; and.
Shawn R CampagnaDepartment of Chemistry, University of Tennessee, Knoxville, TN 37996.
Elizabeth B KujawinskiDepartment of Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution, Woods Hole, MA 02543; and.
E Virginia ArmbrustSchool of Oceanography, University of Washington, Seattle, WA 98195;
Mary Ann MoranDepartment of Marine Sciences, University of Georgia, Athens, GA 30602; mmoran@uga.edu.
University of Georgia · USWoods Hole Oceanographic Institution · USUniversity of Tennessee at Knoxville · USUniversity of Washington · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

About half the carbon fixed by phytoplankton in the ocean is taken up and metabolized by marine bacteria, a transfer that is mediated through the seawater dissolved organic carbon (DOC) pool. The chemical complexity of marine DOC, along with a poor understanding of which compounds form the basis of trophic interactions between bacteria and phytoplankton, have impeded efforts to identify key currencies of this carbon cycle link. Here, we used transcriptional patterns in a bacterial-diatom model system based on vitamin B12 auxotrophy as a sensitive assay for metabolite exchange between marine plankton. The most highly up-regulated genes (up to 374-fold) by a marine Roseobacter clade bacterium when cocultured with the diatom Thalassiosira pseudonana were those encoding the transport and catabolism of 2,3-dihydroxypropane-1-sulfonate (DHPS). This compound has no currently recognized role in the marine microbial food web. As the genes for DHPS catabolism have limited distribution among bacterial taxa, T. pseudonana may use this sulfonate for targeted feeding of beneficial associates. Indeed, DHPS was both a major component of the T. pseudonana cytosol and an abundant microbial metabolite in a diatom bloom in the eastern North Pacific Ocean. Moreover, transcript analysis of the North Pacific samples provided evidence of DHPS catabolism by Roseobacter populations. Other such biogeochemically important metabolites may be common in the ocean but difficult to discriminate against the complex chemical background of seawater. Bacterial transformation of this diatom-derived sulfonate represents a previously unidentified and likely sizeable link in both the marine carbon and sulfur cycles.

Indexed as

Carbon CycleAlkanesulfonatesDiatomsEcosystemGene Expression ProfilingMetabolic Networks and PathwaysModels, BiologicalPhylogenyPhytoplanktonPlanktonRoseobacterSeawaterSulfurVitamin B 122,3-dihydroxypropane-1-sulfonateAlkanesulfonatesSulfurVitamin B 12bacteriaDHPSdiatomssulfonatesvitamin B12

Identifiers

PMID25548163
PMCPMC4299198
OpenAlexW2147113758

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.