Evidence map›Paper›PMID 25545295›Full record

ArticleMolecular ecology2015

Stability of the gorilla microbiome despite simian immunodeficiency virus infection.

Andrew H Moeller, Martine Peeters, Ahidjo Ayouba, Eitel Mpoudi Ngole, Amadine Esteban, Beatrice H Hahn, Howard Ochman

Open access · greenAbstract read
In one paragraph

Article in Molecular ecology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 44 citations in OpenAlex.

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  19. A Summary of the Second Annual HIV Microbiome Workshop.AIDS research and human retroviruses · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 3 countries.

Andrew H MoellerDepartment of Ecology and Evolutionary Biology, Yale University, New Haven, CT, 06511, USA.
Martine Peeters
Ahidjo Ayouba
Eitel Mpoudi Ngole
Amadine Esteban
Beatrice H Hahn
Howard Ochman
Université de Montpellier · FRInstitut de Recherche pour le Développement · FRInstitut de Recherches Médicales et d’Etudes des Plantes Médicinales · CMThe University of Texas at Austin · USUniversity of Pennsylvania · USYale University · US

Funding

Molecular Epidemiology and Natural History of SIVcpzR01AI058715 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI HAHN, BEATRICE H · 2004 to 2013
$6.1M
Natural SIV Reservoirs and Human Zoonotic RiskR37AI050529 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI HAHN, BEATRICE H · 2008 to 2017
$5.7M
Great Ape Reservoirs of Human MalariaR01AI091595 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI HAHN, BEATRICE H · 2011 to 2019
$5.3M
Dynamics of Microbes Infecting the Guts of Great ApesR01GM101209 · NIGMS · YALE UNIVERSITY · PI OCHMAN, HOWARD · 2012 to 2014
$714k
NIAID NIH HHS R01 AI 058715NIAID NIH HHS R01 AI058715NIAID NIH HHS R01 AI091595NIAID NIH HHS R37 AI 050529NIAID NIH HHS R37 AI050529NIGMS NIH HHS R01 GM101209
6 · The paper itself

Abstract

Simian immunodeficiency viruses (SIVs) have been discovered in over 45 primate species; however, the pathogenic potential of most SIV strains remains unknown due to difficulties inherent in observing wild populations. Because those SIV infections that are pathogenic have been shown to induce changes in the host's gut microbiome, monitoring the microbiota present in faecal samples can provide a noninvasive means for studying the effects of SIV infection on the health of wild-living primates. Here, we examine the effects of SIVgor, a close relative of SIVcpz of chimpanzees and HIV-1 of humans, on the gut bacterial communities residing within wild gorillas, revealing that gorilla gut microbiomes are exceptionally robust to SIV infection. In contrast to the microbiomes of HIV-1-infected humans and SIVcpz-infected chimpanzees, SIVgor-infected gorilla microbiomes exhibit neither rises in the frequencies of opportunistic pathogens nor elevated rates of microbial turnover within individual hosts. Regardless of SIV infection status, gorilla microbiomes assort into enterotypes, one of which is compositionally analogous to those identified in humans and chimpanzees. The other gorilla enterotype appears specialized for a leaf-based diet and is enriched in environmentally derived bacterial genera. We hypothesize that the acquisition of this gorilla-specific enterotype was enabled by lowered immune system control over the composition of the microbiome. Our results indicate differences between the pathology of SIVgor and SIVcpz/HIV-1 infections, demonstrating the utility of investigating host microbial ecology as a means for studying disease in wild primates of high conservation priority.

Indexed as

MicrobiotaAnimalsBacteriaFecesGorilla gorillaIntestinesSimian Acquired Immunodeficiency SyndromeSimian Immunodeficiency Virusbacteriacoevolutioncommunity ecologyconservation biologymetabarcodingmicrobial biology

Identifiers

PMID25545295
PMCPMC4302016
OpenAlexW2137685660

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.