Evidence map›Paper›PMID 25544957›Full record

ArticleTheScientificWorldJournal2014

Characterization of the algC gene expression pattern in the multidrug resistant Acinetobacter baumannii AIIMS 7 and correlation with biofilm development on abiotic surface.

Praveen K Sahu, Pavithra S Iyer, Sagar H Barage, Kailas D Sonawane, Balu A Chopade

Open access · goldAbstract read
In one paragraph

Article in TheScientificWorldJournal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.9field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

  1. Virulence · 2026
    Review
  2. Phenotypic and genetic heterogeneity ofMicrobial genomics · 2025
    Article
  3. Article
  4. Review
  5. Article
  6. Acinetobacter baumannii as an oro-dental pathogen: a red alert!!Journal of applied oral science : revista FOB · 2024
    Review
  7. Review
  8. Factors mediatingCurrent research in microbial sciences · 2022
    Review
  9. Mechanisms ProtectingInternational journal of molecular sciences · 2020
    Review
  10. Infection and drug resistance · 2018
    Review
  11. Biology, Mechanism, and Structure of Enzymes in the α-d-Phosphohexomutase Superfamily.Advances in protein chemistry and structural biology · 2017
    Article
  12. Article
  13. Integron-Mediated Antibiotic Resistance inBioMed research international · 2017
    Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Praveen K SahuInstitute of Bioinformatics and Biotechnology, University of Pune, Pune 411 007, India ; Ispat General Hospital, SAIL, Rourkela 769 005, India.
Pavithra S IyerInstitute of Bioinformatics and Biotechnology, University of Pune, Pune 411 007, India.
Sagar H BarageDepartment of Biotechnology, Shivaji University, Kolhapur 416 004, India.
Kailas D SonawaneStructural Bioinformatics Unit, Department of Biochemistry, Shivaji University, Kolhapur 416 004, India.
Balu A ChopadeInstitute of Bioinformatics and Biotechnology, University of Pune, Pune 411 007, India ; Dr. Babasaheb Ambedkar Marathwada University, Aurangabad 431 001, India.
Savitribai Phule Pune University · INShivaji University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Relative quantification of algC gene expression was evaluated in the multidrug resistant strain Acinetobacter baumannii AIIMS 7 biofilm (3 to 96 h, on polystyrene surface) compared to the planktonic counterparts. Comparison revealed differential algC expression pattern with maximum 81.59-fold increase in biofilm cells versus 3.24-fold in planktonic cells (P < 0.05). Expression levels strongly correlated with specific biofilm stages (scale of 3 to 96 h), coinciding maximum at initial surface attachment stage (9 h) and biofilm maturation stage (48 h). Cloning, heterologous expression, and bioinformatics analyses indicated algC gene product as the bifunctional enzyme phosphomannomutase/phosphoglucomutase (PMM/PGM) of ∼ 53 kDa size, which augmented biofilms significantly in algC clones compared to controls (lacking algC gene), further localized by scanning electron microscopy. Moreover, molecular dynamics analysis on the three-dimensional structure of PMM/PGM (simulated up to 10 ns) revealed enzyme structure as stable and similar to that in P. aeruginosa (synthesis of alginate and lipopolysaccharide core) and involved in constitution of biofilm EPS (extracellular polymeric substances). Our observation on differential expression pattern of algC having strong correlation with important biofilm stages, scanning electron-microscopic evidence of biofilm augmentation taken together with predictive enzyme functions via molecular dynamic (MD) simulation, proposes a new basis of A. baumannii AIIMS 7 biofilm development on inanimate surfaces.

Indexed as

Acinetobacter baumanniiBacterial ProteinsBiofilmsDrug Resistance, Multiple, BacterialGene Expression Regulation, BacterialPolystyrenesSurface PropertiesBacterial ProteinsPolystyrenes

Identifiers

PMID25544957
PMCPMC4269089
OpenAlexW2026904261

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.