Evidence map›Paper›PMID 25542417›Full record

ArticleAnalytical biochemistry2015

Quantitation of secreted proteins using mCherry fusion constructs and a fluorescent microplate reader.

Tyler Duellman, John Burnett, Jay Yang

Open access · greenAbstract read
In one paragraph

Article in Analytical biochemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.1field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Oriented Insertion of ESR-Containing Hybrid Proteins in Proteoliposomes.International journal of molecular sciences · 2023
    Article
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  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Tyler DuellmanTranslational Cardiovascular Science Training Program, University of Wisconsin School of Medicine and Public Health, Madison, WI 53705, USA; Department of Anesthesiology, University of Wisconsin School of Medicine and Public Health, Madison, WI 53705, USA.
John BurnettDepartment of Anesthesiology, University of Wisconsin School of Medicine and Public Health, Madison, WI 53705, USA.
Jay YangTranslational Cardiovascular Science Training Program, University of Wisconsin School of Medicine and Public Health, Madison, WI 53705, USA; Department of Anesthesiology, University of Wisconsin School of Medicine and Public Health, Madison, WI 53705, USA. Electronic address: jyang75@wisc.edu.
University of Wisconsin–Madison · US

Funding

Training Program in Translational Cardiovascular Science (TPTCS)T32HL007936 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI Lee Lochbaum Eckhardt, Gail A Robertson · 2001 to 2026
$11.6M
Sigma 1 receptor as a master regulator of pronociceptive protein trafficking in tR01GM107054 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI RUOHO, ARNOLD EINO, YANG, JAY · 2013 to 2016
$1.1M
NHLBI NIH HHS T32 HL007936NHLBI NIH HHS T32 HL07936-12NIGMS NIH HHS R01 GM107054
6 · The paper itself

Abstract

Traditional assays for secreted proteins include methods such as Western blot and enzyme-linked immunosorbent assay (ELISA) detection of the protein in the cell culture medium. We describe a method for the detection of a secreted protein based on fluorescent measurement of an mCherry fusion reporter. This microplate reader-based mCherry fluorescence detection method has a wide dynamic range of 4.5 orders of magnitude and a sensitivity that allows detection of 1 to 2fmol fusion protein. Comparison with the Western blot detection method indicated greater linearity, wider dynamic range, and a similar lower detection threshold for the microplate-based fluorescent detection assay of secreted fusion proteins. An mCherry fusion protein of matrix metalloproteinase-9 (MMP-9), a secreted glycoprotein, was created and expressed by transfection of human embryonic kidney (HEK) 293 cells. The cell culture medium was assayed for the presence of the fluorescent signal up to 32 h after transfection. The secreted MMP-9-mCherry fusion protein was detected 6h after transfection with a linear increase in signal intensity over time. Treatment with chloroquine, a drug known to inhibit the secretion of many proteins, abolished the MMP-9-mCherry secretion, demonstrating the utility of this method in a biological experiment.

Indexed as

Enzyme-Linked Immunosorbent AssayGlycoproteinsHEK293 CellsHumansMatrix Metalloproteinase 9Recombinant Fusion ProteinsSpectrometry, FluorescenceGlycoproteinsMatrix Metalloproteinase 9Recombinant Fusion ProteinsFluorescencemCherryMicroplateMMP-9Secretion

Identifiers

PMID25542417
PMCPMC4500511
OpenAlexW2012340741

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.