Evidence map›Paper›PMID 25539724›Full record

ArticleGenome biology and evolution2014

More than skin deep: functional genomic basis for resistance to amphibian chytridiomycosis.

Amy R Ellison, Tate Tunstall, Graziella V DiRenzo, Myra C Hughey, Eria A Rebollar, Lisa K Belden, Reid N Harris, Roberto Ibáñez, Karen R Lips, Kelly R Zamudio

Open access · goldAbstract read
In one paragraph

Article in Genome biology and evolution, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
8.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 141 citations in OpenAlex.

  1. Article
  2. Article
  3. Probiotic colonization ofInfection and immunity · 2025
    Article
  4. Amphibian (Journal of fungi (Basel, Switzerland) · 2025
    Article
  5. Article
  6. Article
  7. Gene functions of theMicrobial genomics · 2024
    Article
  8. Article
  9. Article
  10. Evolutionary ecology of host competence after a chytrid outbreak in a naive amphibian community.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2023
    Article
  11. The amphibian immune system.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Amy R EllisonDepartment of Ecology and Evolutionary Biology, Cornell University are35@cornell.edu.
Tate TunstallDepartment of Biology, University of Maryland, College Park.
Graziella V DiRenzoDepartment of Biology, University of Maryland, College Park.
Myra C HugheyDepartment of Biological Sciences, Virginia Tech.
Eria A RebollarDepartment of Biology, James Madison University.
Lisa K BeldenDepartment of Biological Sciences, Virginia Tech.
Reid N HarrisDepartment of Biology, James Madison University.
Roberto IbáñezSmithsonian Tropical Research Institute, Balboa, Ancón, Republic of Panamá
Karen R LipsDepartment of Biology, University of Maryland, College Park.
Kelly R ZamudioDepartment of Ecology and Evolutionary Biology, Cornell University.
University of Maryland, College Park · USCornell University · USJames Madison University · USVirginia Tech · USSmithsonian Tropical Research Institute · PA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The amphibian-killing chytrid fungus Batrachochytrium dendrobatidis (Bd) is one of the most generalist pathogens known, capable of infecting hundreds of species globally and causing widespread population declines and extinctions. However, some host species are seemingly unaffected by Bd, tolerating or clearing infections without clinical signs of disease. Variation in host immune responses is commonly evoked for these resistant or tolerant species, yet to date, we have no direct comparison of amphibian species responses to infection at the level of gene expression. In this study, we challenged four Central American frog species that vary in Bd susceptibility, with a sympatric virulent strain of the pathogen. We compared skin and spleen orthologous gene expression using differential expression tests and coexpression gene network analyses. We found that resistant species have reduced skin inflammatory responses and increased expression of genes involved in skin integrity. In contrast, only highly susceptible species exhibited suppression of splenic T-cell genes. We conclude that resistance to chytridiomycosis may be related to a species' ability to escape the immunosuppressive activity of the fungus. Moreover, our results indicate that within-species differences in splenic proteolytic enzyme gene expression may contribute to intraspecific variation in survival. This first comparison of amphibian functional immunogenomic architecture in response to Bd provides insights into key genetic mechanisms underlying variation in disease outcomes among amphibian species.

Indexed as

Gene Expression RegulationAnimalsAnuraChytridiomycotaDisease ResistanceGene Regulatory NetworksGenomicsPeptide HydrolasesSkinSpleenPeptide Hydrolasesamphibian immunityBatrachochytrium dendrobatidiscomparative transcriptomicsimmunogenomicsimmunosuppression

Identifiers

PMID25539724
PMCPMC4316636
OpenAlexW2169412618

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.