Evidence map›Paper›PMID 25538100›Full record

ArticleG3 (Bethesda, Md.)2014

Abiotic and biotic stressors causing equivalent mortality induce highly variable transcriptional responses in the soybean aphid.

Laramy S Enders, Ryan D Bickel, Jennifer A Brisson, Tiffany M Heng-Moss, Blair D Siegfried, Anthony J Zera, Nicholas J Miller

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
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  10. Frontiers in physiology · 2019
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  12. Molecular Ecological Basis of Grasshopper (Frontiers in physiology · 2017
    Article
  13. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Laramy S EndersDepartment of Entomology, University of Nebraska-Lincoln, Lincoln, Nebraska 68583-0816.
Ryan D BickelDepartment of Biology, University of Rochester, Rochester, New York 14627-0211.
Jennifer A BrissonDepartment of Biology, University of Rochester, Rochester, New York 14627-0211.
Tiffany M Heng-MossDepartment of Entomology, University of Nebraska-Lincoln, Lincoln, Nebraska 68583-0816.
Blair D SiegfriedDepartment of Entomology, University of Nebraska-Lincoln, Lincoln, Nebraska 68583-0816.
Anthony J ZeraSchool of Biological Sciences, University of Nebraska-Lincoln, Lincoln, Nebraska 68583-0118.
Nicholas J MillerDepartment of Entomology, University of Nebraska-Lincoln, Lincoln, Nebraska 68583-0816 nmiller4@unl.edu.
University of Nebraska–Lincoln · USUniversity of Rochester · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Environmental stress affects basic organismal functioning and can cause physiological, developmental, and reproductive impairment. However, in many nonmodel organisms, the core molecular stress response remains poorly characterized and the extent to which stress-induced transcriptional changes differ across qualitatively different stress types is largely unexplored. The current study examines the molecular stress response of the soybean aphid (Aphis glycines) using RNA sequencing and compares transcriptional responses to multiple stressors (heat, starvation, and plant defenses) at a standardized stress level (27% adult mortality). Stress-induced transcriptional changes showed remarkable variation, with starvation, heat, and plant defensive stress altering the expression of 3985, 510, and 12 genes, respectively. Molecular responses showed little overlap across all three stressors. However, a common transcriptional stress response was identified under heat and starvation, involved with up-regulation of glycogen biosynthesis and molecular chaperones and down-regulation of bacterial endosymbiont cellular and insect cuticular components. Stressor-specific responses indicated heat affected expression of heat shock proteins and cuticular components, whereas starvation altered a diverse set of genes involved in primary metabolism, oxidative reductive processes, nucleosome and histone assembly, and the regulation of DNA repair and replication. Exposure to host plant defenses elicited the weakest response, of which half of the genes were of unknown function. This study highlights the need for standardizing stress levels when comparing across stress types and provides a basis for understanding the role of general vs. stressor specific molecular responses in aphids.

Indexed as

AnimalsAphidsGenes, InsectSequence Analysis, RNAStress, PhysiologicalTranscriptomeheatplant defenseRNA-seqstarvationtranscriptomics

Identifiers

PMID25538100
PMCPMC4321034
OpenAlexW2165325036

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.